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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2161 O_BomoOtmSK11946_internal:A_BomoOtmSK_comp14130_c0_seq2
238bp
 tudor_domain-containing_protein_7_isoform_X1_[Bombyx_mori]
GO:0002089 P lens morphogenesis in camera-type eye
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0010608 P posttranscriptional regulation of gene expression
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0035770 C ribonucleoprotein granule
GO:0043186 C P granule
GO:0070306 P lens fiber cell differentiation
2162 O_BomoOtmSK11947_3prime_partial:A_BomoOtmSK_comp14131_c0_seq1
845bp
 mitogen-activated_protein_kinase_kinase_kinase_4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001890 P placenta development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0010225 P response to UV-C
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019100 P male germ-line sex determination
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0035556 P intracellular signal transduction
GO:0043507 P positive regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0048263 P determination of dorsal identity
GO:0048471 C perinuclear region of cytoplasm
GO:0051973 P positive regulation of telomerase activity
GO:0060718 P chorionic trophoblast cell differentiation
GO:1900745 P positive regulation of p38MAPK cascade
GO:1904355 P positive regulation of telomere capping
2163 O_BomoOtmSK11948_complete:A_BomoOtmSK_comp14131_c0_seq1
158bp
2164 O_BomoOtmSK11949_complete:A_BomoOtmSK_comp14131_c0_seq1
113bp
2165 O_BomoOtmSK1194_complete:A_BomoOtmSK_comp4726_c0_seq1
102bp
2166 O_BomoOtmSK11950_complete:A_BomoOtmSK_comp14131_c0_seq1
111bp
2167 O_BomoOtmSK11951_5prime_partial:A_BomoOtmSK_comp14133_c0_seq1
487bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0032364 P oxygen homeostasis
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060347 P heart trabecula formation
GO:0060412 P ventricular septum morphogenesis
GO:0060711 P labyrinthine layer development
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071731 P response to nitric oxide
2168 O_BomoOtmSK11952_3prime_partial:A_BomoOtmSK_comp14134_c0_seq2
267bp
 focadhesin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005925 C focal adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
2169 O_BomoOtmSK11953_3prime_partial:A_BomoOtmSK_comp14135_c0_seq1
235bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2170 O_BomoOtmSK11954_5prime_partial:A_BomoOtmSK_comp14135_c0_seq1
232bp
 hypothetical_protein_RR48_12638_[Papilio_machaon]
2171 O_BomoOtmSK11955_complete:A_BomoOtmSK_comp14135_c0_seq1
194bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
2172 O_BomoOtmSK11956_complete:A_BomoOtmSK_comp14137_c0_seq1
143bp
 uncharacterized_protein_C14orf119_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
2173 O_BomoOtmSK11957_complete:A_BomoOtmSK_comp14137_c0_seq2
143bp
 uncharacterized_protein_C14orf119_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
2174 O_BomoOtmSK11958_complete:A_BomoOtmSK_comp14137_c0_seq3
167bp
 uncharacterized_protein_C14orf119_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
2175 O_BomoOtmSK11959_complete:A_BomoOtmSK_comp14138_c0_seq1
609bp
 SUMO-activating_enzyme_subunit_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019948 F SUMO activating enzyme activity
GO:0031510 C SUMO activating enzyme complex
GO:0046872 F metal ion binding
2176 O_BomoOtmSK1195_5prime_partial:A_BomoOtmSK_comp4731_c0_seq1
359bp
 uncharacterized_protein_LOC101739352_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
2177 O_BomoOtmSK11960_complete:A_BomoOtmSK_comp14138_c0_seq1
108bp
2178 O_BomoOtmSK11961_complete:A_BomoOtmSK_comp14138_c0_seq1
103bp
2179 O_BomoOtmSK11962_complete:A_BomoOtmSK_comp14139_c0_seq1
359bp
 uncharacterized_protein_LOC101741444_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2180 O_BomoOtmSK11963_complete:A_BomoOtmSK_comp14139_c0_seq1
100bp
2181 O_BomoOtmSK11964_complete:A_BomoOtmSK_comp14140_c0_seq1
1043bp
 serine/threonine-protein_kinase_N_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0051301 P cell division
2182 O_BomoOtmSK11965_complete:A_BomoOtmSK_comp14140_c0_seq1
168bp
2183 O_BomoOtmSK11966_internal:A_BomoOtmSK_comp14141_c0_seq2
122bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744024_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
2184 O_BomoOtmSK11967_complete:A_BomoOtmSK_comp14142_c0_seq1
442bp
 microfibrillar-associated_protein_1_[Bombyx_mori]
GO:0001527 C microfibril
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0044822 F RNA binding
2185 O_BomoOtmSK11968_complete:A_BomoOtmSK_comp14142_c0_seq1
103bp
2186 O_BomoOtmSK11969_complete:A_BomoOtmSK_comp14143_c1_seq1
188bp
 uncharacterized_protein_LOC778477_[Bombyx_mori]
2187 O_BomoOtmSK1196_internal:A_BomoOtmSK_comp4736_c0_seq1
137bp
 prolow-density_lipoprotein_receptor-related_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
2188 O_BomoOtmSK11970_complete:A_BomoOtmSK_comp14146_c0_seq1
122bp
 uncharacterized_protein_LOC100141456_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0033617 P mitochondrial cytochrome c oxidase assembly
2189 O_BomoOtmSK11971_5prime_partial:A_BomoOtmSK_comp14147_c0_seq1
159bp
 blastopia_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2190 O_BomoOtmSK11972_3prime_partial:A_BomoOtmSK_comp14147_c0_seq1
140bp
 uncharacterized_protein_LOC105841659_[Bombyx_mori]
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