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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1771 O_BomoOtmSK11595_complete:A_BomoOtmSK_comp13968_c0_seq3
123bp
 hypothetical_protein_AUG49_10990_[Catenulispora_sp._13_1_20CM_3_70_7]
1772 O_BomoOtmSK11596_complete:A_BomoOtmSK_comp13968_c0_seq3
104bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
1773 O_BomoOtmSK11597_complete:A_BomoOtmSK_comp13968_c0_seq4
289bp
 glycerol_kinase-2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
1774 O_BomoOtmSK11598_complete:A_BomoOtmSK_comp13968_c0_seq4
123bp
 hypothetical_protein_AUG49_10990_[Catenulispora_sp._13_1_20CM_3_70_7]
1775 O_BomoOtmSK11599_5prime_partial:A_BomoOtmSK_comp13968_c0_seq5
110bp
 glycerol_kinase-2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
1776 O_BomoOtmSK1159_3prime_partial:A_BomoOtmSK_comp4670_c0_seq1
377bp
 calcium-independent_phospholipase_A2-gamma_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0048471 C perinuclear region of cytoplasm
1777 O_BomoOtmSK115_internal:A_BomoOtmSK_comp441_c0_seq1
155bp
 iduronate_2-sulfatase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004423 F iduronate-2-sulfatase activity
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1778 O_BomoOtmSK11600_3prime_partial:A_BomoOtmSK_comp13969_c0_seq1
185bp
1779 O_BomoOtmSK11601_complete:A_BomoOtmSK_comp13969_c0_seq1
142bp
 PREDICTED:_protein_phosphatase_1_regulatory_subunit_11-like_[Amyelois_transitella]
GO:0000164 C protein phosphatase type 1 complex
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0032515 P negative regulation of phosphoprotein phosphatase activity
1780 O_BomoOtmSK11602_complete:A_BomoOtmSK_comp13972_c0_seq1
701bp
 U4/U6_small_nuclear_ribonucleoprotein_Prp3_[Bombyx_mori]
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046540 C U4/U6 x U5 tri-snRNP complex
1781 O_BomoOtmSK11603_5prime_partial:A_BomoOtmSK_comp13972_c0_seq1
335bp
1782 O_BomoOtmSK11604_complete:A_BomoOtmSK_comp13972_c0_seq1
179bp
1783 O_BomoOtmSK11605_5prime_partial:A_BomoOtmSK_comp13973_c0_seq1
142bp
1784 O_BomoOtmSK11606_3prime_partial:A_BomoOtmSK_comp13973_c0_seq1
119bp
 ral_GTPase-activating_protein_subunit_beta_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0032484 P Ral protein signal transduction
GO:0032880 P regulation of protein localization
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060178 P regulation of exocyst localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
1785 O_BomoOtmSK11607_complete:A_BomoOtmSK_comp13974_c0_seq1
1079bp
 uncharacterized_protein_LOC101742598_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1786 O_BomoOtmSK11608_complete:A_BomoOtmSK_comp13974_c0_seq1
105bp
1787 O_BomoOtmSK11609_complete:A_BomoOtmSK_comp13974_c0_seq2
901bp
 RE1-silencing_transcription_factor_isoform_X4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001764 P neuron migration
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010629 P negative regulation of gene expression
GO:0021610 P facial nerve morphogenesis
GO:0021785 P branchiomotor neuron axon guidance
GO:0022008 P neurogenesis
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
1788 O_BomoOtmSK1160_internal:A_BomoOtmSK_comp4673_c0_seq1
202bp
 autophagy-related_protein_2_homolog_B_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0005811 C lipid droplet
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0034045 C phagophore assembly site membrane
GO:0044804 P autophagy of nucleus
1789 O_BomoOtmSK11610_complete:A_BomoOtmSK_comp13974_c0_seq2
105bp
1790 O_BomoOtmSK11611_complete:A_BomoOtmSK_comp13974_c0_seq3
892bp
 RE1-silencing_transcription_factor_isoform_X4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001764 P neuron migration
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010629 P negative regulation of gene expression
GO:0021610 P facial nerve morphogenesis
GO:0021785 P branchiomotor neuron axon guidance
GO:0022008 P neurogenesis
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
1791 O_BomoOtmSK11612_complete:A_BomoOtmSK_comp13974_c0_seq4
1070bp
 uncharacterized_protein_LOC101742598_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1792 O_BomoOtmSK11613_complete:A_BomoOtmSK_comp13976_c0_seq1
290bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1793 O_BomoOtmSK11614_complete:A_BomoOtmSK_comp13976_c0_seq1
137bp
1794 O_BomoOtmSK11615_complete:A_BomoOtmSK_comp13976_c0_seq1
119bp
1795 O_BomoOtmSK11616_5prime_partial:A_BomoOtmSK_comp13976_c0_seq2
511bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1796 O_BomoOtmSK11617_complete:A_BomoOtmSK_comp13976_c0_seq2
137bp
1797 O_BomoOtmSK11618_complete:A_BomoOtmSK_comp13976_c0_seq2
114bp
1798 O_BomoOtmSK11619_complete:A_BomoOtmSK_comp13977_c0_seq1
230bp
 dual_specificity_protein_phosphatase_23_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0070062 C extracellular exosome
1799 O_BomoOtmSK1161_complete:A_BomoOtmSK_comp4677_c0_seq1
345bp
 protein_NDRG3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0070062 C extracellular exosome
1800 O_BomoOtmSK11620_3prime_partial:A_BomoOtmSK_comp13977_c0_seq1
114bp
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