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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1501 O_BomoOtmSK11351_5prime_partial:A_BomoOtmSK_comp13881_c0_seq7
154bp
1502 O_BomoOtmSK11352_5prime_partial:A_BomoOtmSK_comp13881_c0_seq7
144bp
1503 O_BomoOtmSK11353_complete:A_BomoOtmSK_comp13881_c0_seq7
131bp
1504 O_BomoOtmSK11354_3prime_partial:A_BomoOtmSK_comp13881_c0_seq8
703bp
 PH_and_SEC7_domain-containing_protein_4_isoform_X1_[Bombyx_mori]
GO:0001409 F guanine nucleotide transmembrane transporter activity
GO:0001726 C ruffle
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005543 F phospholipid binding
GO:0005886 C plasma membrane
GO:0015854 P guanine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030182 P neuron differentiation
GO:0032012 P regulation of ARF protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:1903790 P guanine nucleotide transmembrane transport
1505 O_BomoOtmSK11355_complete:A_BomoOtmSK_comp13881_c0_seq8
159bp
1506 O_BomoOtmSK11356_5prime_partial:A_BomoOtmSK_comp13881_c0_seq8
154bp
1507 O_BomoOtmSK11357_5prime_partial:A_BomoOtmSK_comp13881_c0_seq8
144bp
1508 O_BomoOtmSK11358_complete:A_BomoOtmSK_comp13881_c0_seq9
243bp
 PH_and_SEC7_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
GO:0001726 C ruffle
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030182 P neuron differentiation
GO:0032012 P regulation of ARF protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
1509 O_BomoOtmSK11359_complete:A_BomoOtmSK_comp13881_c0_seq9
131bp
1510 O_BomoOtmSK1135_3prime_partial:A_BomoOtmSK_comp4639_c0_seq1
475bp
 beta-mannosidase_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004567 F beta-mannosidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
1511 O_BomoOtmSK11360_complete:A_BomoOtmSK_comp13881_c0_seq10
539bp
 PH_and_SEC7_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
GO:0001726 C ruffle
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030182 P neuron differentiation
GO:0032012 P regulation of ARF protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
1512 O_BomoOtmSK11361_complete:A_BomoOtmSK_comp13881_c0_seq10
131bp
1513 O_BomoOtmSK11362_3prime_partial:A_BomoOtmSK_comp13881_c0_seq11
361bp
 PH_and_SEC7_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
GO:0001409 F guanine nucleotide transmembrane transporter activity
GO:0001726 C ruffle
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005543 F phospholipid binding
GO:0005886 C plasma membrane
GO:0015854 P guanine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030182 P neuron differentiation
GO:0032012 P regulation of ARF protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:1903790 P guanine nucleotide transmembrane transport
1514 O_BomoOtmSK11363_5prime_partial:A_BomoOtmSK_comp13881_c0_seq11
154bp
1515 O_BomoOtmSK11364_5prime_partial:A_BomoOtmSK_comp13881_c0_seq11
144bp
1516 O_BomoOtmSK11365_complete:A_BomoOtmSK_comp13881_c0_seq11
131bp
1517 O_BomoOtmSK11366_complete:A_BomoOtmSK_comp13881_c0_seq12
271bp
 PH_and_SEC7_domain-containing_protein_4_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032011 P ARF protein signal transduction
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1518 O_BomoOtmSK11367_complete:A_BomoOtmSK_comp13881_c0_seq12
159bp
1519 O_BomoOtmSK11368_3prime_partial:A_BomoOtmSK_comp13883_c2_seq1
127bp
 uncharacterized_protein_LOC101743520_[Bombyx_mori]
1520 O_BomoOtmSK11369_3prime_partial:A_BomoOtmSK_comp13883_c2_seq2
219bp
 uncharacterized_protein_LOC101743520_[Bombyx_mori]
1521 O_BomoOtmSK1136_internal:A_BomoOtmSK_comp4639_c0_seq2
878bp
 beta-mannosidase_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004567 F beta-mannosidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
1522 O_BomoOtmSK11370_complete:A_BomoOtmSK_comp13883_c2_seq3
131bp
 uncharacterized_protein_LOC101743520_[Bombyx_mori]
1523 O_BomoOtmSK11371_complete:A_BomoOtmSK_comp13884_c0_seq1
157bp
 proteolipid_protein_2_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1524 O_BomoOtmSK11372_5prime_partial:A_BomoOtmSK_comp13885_c0_seq2
187bp
 epsin-1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0008134 F transcription factor binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0043195 C terminal bouton
GO:0044325 F transmembrane transporter binding
1525 O_BomoOtmSK11373_3prime_partial:A_BomoOtmSK_comp13885_c0_seq2
154bp
1526 O_BomoOtmSK11374_complete:A_BomoOtmSK_comp13887_c0_seq1
276bp
 F-box/WD_repeat-containing_protein_4_[Bombyx_mori]
1527 O_BomoOtmSK11375_complete:A_BomoOtmSK_comp13887_c0_seq1
143bp
 F-box/WD_repeat-containing_protein_4_[Bombyx_mori]
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0042733 P embryonic digit morphogenesis
GO:0051216 P cartilage development
GO:0060173 P limb development
1528 O_BomoOtmSK11376_complete:A_BomoOtmSK_comp13887_c0_seq3
422bp
 F-box/WD_repeat-containing_protein_4_[Bombyx_mori]
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0042733 P embryonic digit morphogenesis
GO:0051216 P cartilage development
GO:0060173 P limb development
1529 O_BomoOtmSK11377_internal:A_BomoOtmSK_comp13889_c0_seq1
113bp
 uncharacterized_protein_LOC105842732_[Bombyx_mori]
1530 O_BomoOtmSK11378_complete:A_BomoOtmSK_comp13890_c0_seq1
885bp
 LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_54_[Bombyx_mori]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
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