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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1321 O_BomoOtmSK1118_complete:A_BomoOtmSK_comp4619_c0_seq1
152bp
 uncharacterized_protein_LOC101745527_isoform_X4_[Bombyx_mori]
1322 O_BomoOtmSK11190_complete:A_BomoOtmSK_comp13828_c0_seq1
106bp
1323 O_BomoOtmSK11191_complete:A_BomoOtmSK_comp13830_c0_seq1
487bp
 uncharacterized_protein_LOC100174822_[Bombyx_mori]
1324 O_BomoOtmSK11192_3prime_partial:A_BomoOtmSK_comp13831_c0_seq1
225bp
 F-box_only_protein_9_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0032006 P regulation of TOR signaling
GO:0045087 P innate immune response
GO:0045444 P fat cell differentiation
1325 O_BomoOtmSK11193_complete:A_BomoOtmSK_comp13831_c0_seq1
169bp
1326 O_BomoOtmSK11194_5prime_partial:A_BomoOtmSK_comp13831_c0_seq1
112bp
1327 O_BomoOtmSK11195_3prime_partial:A_BomoOtmSK_comp13832_c0_seq1
552bp
 diphthine--ammonia_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0017178 F diphthine-ammonia ligase activity
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0051321 P meiotic cell cycle
GO:2000765 P regulation of cytoplasmic translation
1328 O_BomoOtmSK11196_complete:A_BomoOtmSK_comp13832_c0_seq1
123bp
1329 O_BomoOtmSK11197_complete:A_BomoOtmSK_comp13833_c0_seq1
100bp
 probable_oligoribonuclease_isoform_X2_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005759 C mitochondrial matrix
GO:0005925 C focal adhesion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
1330 O_BomoOtmSK11198_complete:A_BomoOtmSK_comp13834_c0_seq1
218bp
 DNA-directed_RNA_polymerase_III_subunit_RPC7-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0008283 P cell population proliferation
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
1331 O_BomoOtmSK11199_3prime_partial:A_BomoOtmSK_comp13837_c0_seq1
641bp
 uncharacterized_protein_LOC101740850_isoform_X2_[Bombyx_mori]
1332 O_BomoOtmSK1119_3prime_partial:A_BomoOtmSK_comp4619_c0_seq2
313bp
 gastrula_zinc_finger_protein_XlCGF17.1_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
1333 O_BomoOtmSK111_3prime_partial:A_BomoOtmSK_comp410_c1_seq1
237bp
 synaptic_vesicle_glycoprotein_2B_isoform_X2_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
1334 O_BomoOtmSK11200_5prime_partial:A_BomoOtmSK_comp13837_c0_seq1
117bp
1335 O_BomoOtmSK11201_internal:A_BomoOtmSK_comp13837_c0_seq2
103bp
 uncharacterized_protein_LOC101740850_isoform_X3_[Bombyx_mori]
1336 O_BomoOtmSK11202_3prime_partial:A_BomoOtmSK_comp13837_c0_seq3
651bp
 uncharacterized_protein_LOC101740850_isoform_X1_[Bombyx_mori]
1337 O_BomoOtmSK11203_5prime_partial:A_BomoOtmSK_comp13837_c0_seq3
117bp
1338 O_BomoOtmSK11204_3prime_partial:A_BomoOtmSK_comp13839_c0_seq1
808bp
 disheveled-associated_activator_of_morphogenesis_1_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
1339 O_BomoOtmSK11205_complete:A_BomoOtmSK_comp13839_c0_seq1
237bp
1340 O_BomoOtmSK11206_complete:A_BomoOtmSK_comp13839_c0_seq1
216bp
1341 O_BomoOtmSK11207_complete:A_BomoOtmSK_comp13839_c0_seq1
102bp
1342 O_BomoOtmSK11208_3prime_partial:A_BomoOtmSK_comp13839_c0_seq2
558bp
 disheveled-associated_activator_of_morphogenesis_1_isoform_X1_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
1343 O_BomoOtmSK11209_5prime_partial:A_BomoOtmSK_comp13839_c0_seq2
269bp
1344 O_BomoOtmSK1120_5prime_partial:A_BomoOtmSK_comp4620_c0_seq1
137bp
 PREDICTED:_mitochondrial_carnitine/acylcarnitine_carrier_protein_isoform_X1_[Papilio_polytes]
1345 O_BomoOtmSK11210_5prime_partial:A_BomoOtmSK_comp13839_c0_seq2
134bp
1346 O_BomoOtmSK11211_complete:A_BomoOtmSK_comp13839_c0_seq2
102bp
1347 O_BomoOtmSK11212_complete:A_BomoOtmSK_comp13840_c0_seq1
172bp
 methionine_aminopeptidase_1D,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1348 O_BomoOtmSK11213_complete:A_BomoOtmSK_comp13840_c0_seq2
169bp
 methionine_aminopeptidase_1D,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1349 O_BomoOtmSK11214_complete:A_BomoOtmSK_comp13840_c0_seq3
303bp
 methionine_aminopeptidase_1D,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1350 O_BomoOtmSK11215_complete:A_BomoOtmSK_comp13840_c0_seq5
306bp
 methionine_aminopeptidase_1D,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
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