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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8851 O_BomaMG23208_3prime_partial:A_BomaMG_comp79946_c0_seq1
859bp
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:2000171 P negative regulation of dendrite development
8852 O_BomaMG23209_5prime_partial:A_BomaMG_comp79971_c0_seq1
133bp
GO:0004857 F enzyme inhibitor activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043086 P negative regulation of catalytic activity
8853 O_BomaMG2320_complete:A_BomaMG_comp13709_c0_seq1
204bp
mitochondrial_ribosomal_protein_L22_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
8854 O_BomaMG23210_internal:A_BomaMG_comp79989_c0_seq1
134bp
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008360 P regulation of cell shape
GO:0022416 P chaeta development
GO:0030031 P cell projection assembly
GO:0030154 P cell differentiation
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0050807 P regulation of synapse organization
8855 O_BomaMG23212_complete:A_BomaMG_comp80049_c0_seq1
157bp
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0035519 P protein K29-linked ubiquitination
GO:0036297 P interstrand cross-link repair
GO:0044314 P protein K27-linked ubiquitination
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
8856 O_BomaMG23213_internal:A_BomaMG_comp80167_c0_seq1
290bp
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
8857 O_BomaMG23216_complete:A_BomaMG_comp80209_c0_seq1
762bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8858 O_BomaMG23218_3prime_partial:A_BomaMG_comp80269_c0_seq1
444bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0032981 P mitochondrial respiratory chain complex I assembly
8859 O_BomaMG23219_complete:A_BomaMG_comp80355_c0_seq1
505bp
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
8860 O_BomaMG2321_internal:A_BomaMG_comp13721_c0_seq1
126bp
PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]
8861 O_BomaMG23220_complete:A_BomaMG_comp80355_c0_seq1
270bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0032781 P positive regulation of ATP-dependent activity
GO:0035176 P social behavior
8862 O_BomaMG23223_internal:A_BomaMG_comp80406_c0_seq1
131bp
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
8863 O_BomaMG23224_complete:A_BomaMG_comp80435_c0_seq1
463bp
GO:0000154 P rRNA modification
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016020 C membrane
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031428 C box C/D RNP complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0070761 C pre-snoRNP complex
GO:1990226 F histone methyltransferase binding
8864 O_BomaMG23225_3prime_partial:A_BomaMG_comp80545_c0_seq1
447bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
8865 O_BomaMG23227_complete:A_BomaMG_comp80614_c0_seq1
326bp
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030914 C SAGA complex
GO:0043966 P histone H3 acetylation
GO:0051457 P maintenance of protein location in nucleus
8866 O_BomaMG23228_complete:A_BomaMG_comp80630_c0_seq1
413bp
GO:0002230 P positive regulation of defense response to virus by host
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
8867 O_BomaMG2322_5prime_partial:A_BomaMG_comp13725_c0_seq1
158bp
PREDICTED:_lysozyme-like_[Bombyx_mori]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
8868 O_BomaMG23230_5prime_partial:A_BomaMG_comp80652_c0_seq1
504bp
GO:0000902 P cell morphogenesis
GO:0000910 P cytokinesis
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007399 P nervous system development
GO:0015031 P protein transport
GO:0017048 F small GTPase binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030496 C midbody
GO:0032147 P activation of protein kinase activity
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042307 P positive regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043547 P positive regulation of GTPase activity
GO:0045666 P positive regulation of neuron differentiation
GO:0045859 P regulation of protein kinase activity
GO:0051260 P protein homooligomerization
GO:0051301 P cell division
GO:0051988 P regulation of attachment of spindle microtubules to kinetochore
GO:0070301 P cellular response to hydrogen peroxide
GO:0070830 P bicellular tight junction assembly
GO:0071277 P cellular response to calcium ion
GO:0071479 P cellular response to ionizing radiation
GO:0072686 C mitotic spindle
GO:0090630 P activation of GTPase activity
GO:0097149 C centralspindlin complex
8869 O_BomaMG23231_5prime_partial:A_BomaMG_comp80654_c0_seq1
195bp
GO:0000139 C Golgi membrane
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0048471 C perinuclear region of cytoplasm
8870 O_BomaMG23232_3prime_partial:A_BomaMG_comp80659_c0_seq1
438bp
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0007405 P neuroblast proliferation
GO:0022008 P neurogenesis
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0042585 C germinal vesicle
GO:0048132 P female germ-line stem cell asymmetric division
8871 O_BomaMG23233_3prime_partial:A_BomaMG_comp80710_c0_seq1
525bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007394 P dorsal closure, elongation of leading edge cells
GO:0007411 P axon guidance
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019898 C extrinsic component of membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051017 P actin filament bundle assembly
8872 O_BomaMG23234_complete:A_BomaMG_comp80849_c0_seq1
479bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0001745 P compound eye morphogenesis
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007355 P anterior region determination
GO:0007389 P pattern specification process
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007420 P brain development
GO:0007628 P adult walking behavior
GO:0008056 P ocellus development
GO:0010628 P positive regulation of gene expression
GO:0035284 P brain segmentation
GO:0035288 P anterior head segmentation
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042463 P ocellus photoreceptor cell development
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045315 P positive regulation of compound eye photoreceptor development
GO:0045871 P obsolete negative regulation of rhodopsin gene expression
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046552 P photoreceptor cell fate commitment
GO:0046982 F protein heterodimerization activity
GO:0048816 P ocellus morphogenesis
GO:0061541 P rhabdomere morphogenesis
8873 O_BomaMG23235_complete:A_BomaMG_comp80886_c0_seq1
265bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
8874 O_BomaMG23236_5prime_partial:A_BomaMG_comp81085_c0_seq1
232bp
GO:0000387 P spliceosomal snRNP assembly
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0097504 C Gemini of coiled bodies
8875 O_BomaMG23238_3prime_partial:A_BomaMG_comp81282_c0_seq1
123bp
8876 O_BomaMG23239_complete:A_BomaMG_comp81463_c0_seq1
139bp
GO:0000976 F transcription cis-regulatory region binding
GO:0001221 F transcription coregulator binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0007596 P blood coagulation
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0071535 F RING-like zinc finger domain binding
8877 O_BomaMG2323_internal:A_BomaMG_comp13726_c0_seq1
120bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_12_[Bombyx_mori]
8878 O_BomaMG23241_3prime_partial:A_BomaMG_comp81596_c0_seq1
280bp
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0035872 P nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070417 P cellular response to cold
GO:0070936 P protein K48-linked ubiquitination
GO:1901797 P negative regulation of signal transduction by p53 class mediator
GO:1901981 F phosphatidylinositol phosphate binding
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2000374 P regulation of oxygen metabolic process
GO:2001271 P negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
8879 O_BomaMG23243_complete:A_BomaMG_comp81752_c0_seq1
354bp
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0071407 P cellular response to organic cyclic compound
8880 O_BomaMG23245_internal:A_BomaMG_comp81779_c0_seq1
474bp
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