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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4531 O_BomaMG16698_3prime_partial:A_BomaMG_comp25355_c0_seq2
166bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0008333 P endosome to lysosome transport
GO:0050811 F GABA receptor binding
4532 O_BomaMG166_internal:A_BomaMG_comp1893_c0_seq1
211bp
PREDICTED:_CCR4-NOT_transcription_complex_subunit_6_isoform_X1_[Bombyx_mori]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008284 P positive regulation of cell population proliferation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0035195 P gene silencing by miRNA
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
4533 O_BomaMG16700_3prime_partial:A_BomaMG_comp25355_c0_seq3
123bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005739 C mitochondrion
GO:0007287 P Nebenkern assembly
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0017022 F myosin binding
GO:0019233 P sensory perception of pain
GO:0019895 F obsolete kinesin-associated mitochondrial adaptor activity
GO:0019896 P axonal transport of mitochondrion
GO:0030382 P sperm mitochondrion organization
GO:0048311 P mitochondrion distribution
GO:0051654 P establishment of mitochondrion localization
GO:1904115 C axon cytoplasm
4534 O_BomaMG16702_3prime_partial:A_BomaMG_comp25355_c0_seq4
220bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006493 P protein O-linked glycosylation
GO:0006605 P protein targeting
GO:0008333 P endosome to lysosome transport
GO:0050811 F GABA receptor binding
4535 O_BomaMG16704_3prime_partial:A_BomaMG_comp25355_c0_seq5
112bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0008333 P endosome to lysosome transport
GO:0050811 F GABA receptor binding
4536 O_BomaMG16709_complete:A_BomaMG_comp25357_c9_seq1
839bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045787 P positive regulation of cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
4537 O_BomaMG1670_complete:A_BomaMG_comp12667_c0_seq1
216bp
PREDICTED:_UPF0428_protein_CXorf56_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4538 O_BomaMG16710_5prime_partial:A_BomaMG_comp25357_c12_seq1
110bp
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
4539 O_BomaMG16711_complete:A_BomaMG_comp25357_c16_seq1
451bp
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006486 P protein glycosylation
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018392 F glycoprotein 3-alpha-L-fucosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0033932 F 1,3-alpha-L-fucosidase activity
GO:0036071 P N-glycan fucosylation
GO:0046920 F alpha-(1->3)-fucosyltransferase activity
4540 O_BomaMG16712_complete:A_BomaMG_comp25357_c20_seq1
244bp
GO:0004059 F aralkylamine N-acetyltransferase activity
GO:0004060 F arylamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006584 P catecholamine metabolic process
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030187 P melatonin biosynthetic process
GO:0030431 P sleep
GO:0042420 P dopamine catabolic process
GO:0042429 P serotonin catabolic process
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0046334 P octopamine catabolic process
GO:0048066 P developmental pigmentation
4541 O_BomaMG16713_complete:A_BomaMG_comp25358_c1_seq1
399bp
GO:0000813 C ESCRT I complex
GO:0001558 P regulation of cell growth
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016197 P endosomal transport
GO:0019058 P viral life cycle
GO:0030154 P cell differentiation
GO:0030216 P keratinocyte differentiation
GO:0030374 F nuclear receptor coactivator activity
GO:0031625 F ubiquitin protein ligase binding
GO:0031902 C late endosome membrane
GO:0036258 P multivesicular body assembly
GO:0039702 P viral budding via host ESCRT complex
GO:0040008 P regulation of growth
GO:0042803 F protein homodimerization activity
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043405 P regulation of MAP kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046755 P viral budding
GO:0046790 F virion binding
GO:0048306 F calcium-dependent protein binding
GO:0048524 P positive regulation of viral process
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0075733 P intracellular transport of virus
GO:0097352 P autophagosome maturation
GO:1902186 P obsolete regulation of viral release from host cell
GO:1902188 P obsolete positive regulation of viral release from host cell
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
GO:1903772 P regulation of viral budding via host ESCRT complex
GO:1903774 P positive regulation of viral budding via host ESCRT complex
GO:2000397 P positive regulation of ubiquitin-dependent endocytosis
4542 O_BomaMG16714_complete:A_BomaMG_comp25358_c2_seq1
660bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
4543 O_BomaMG16715_complete:A_BomaMG_comp25360_c4_seq9
273bp
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0045022 P early endosome to late endosome transport
4544 O_BomaMG16716_3prime_partial:A_BomaMG_comp25361_c1_seq1
266bp
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4545 O_BomaMG16719_complete:A_BomaMG_comp25361_c2_seq1
227bp
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4546 O_BomaMG1671_complete:A_BomaMG_comp12668_c0_seq1
1716bp
cadherin-like_membrane_protein_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
4547 O_BomaMG16720_5prime_partial:A_BomaMG_comp25361_c6_seq1
242bp
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030867 C rough endoplasmic reticulum membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
4548 O_BomaMG16721_5prime_partial:A_BomaMG_comp25361_c6_seq3
138bp
GO:0000224 F peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006516 P glycoprotein catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4549 O_BomaMG16722_complete:A_BomaMG_comp25361_c6_seq3
128bp
4550 O_BomaMG16723_5prime_partial:A_BomaMG_comp25361_c6_seq4
242bp
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030867 C rough endoplasmic reticulum membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
4551 O_BomaMG16724_internal:A_BomaMG_comp25363_c0_seq1
836bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
4552 O_BomaMG16725_5prime_partial:A_BomaMG_comp25363_c0_seq2
1066bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
4553 O_BomaMG16726_3prime_partial:A_BomaMG_comp25364_c0_seq1
563bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0016874 F ligase activity
GO:0017178 F diphthine-ammonia ligase activity
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0031647 P regulation of protein stability
GO:1903955 P positive regulation of protein targeting to mitochondrion
4554 O_BomaMG16728_complete:A_BomaMG_comp25365_c0_seq1
177bp
GO:0005375 F copper ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006878 P cellular copper ion homeostasis
GO:0015088 F copper ion transmembrane transporter activity
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
GO:0043025 C neuronal cell body
GO:0055037 C recycling endosome
GO:0072719 P cellular response to cisplatin
GO:1902861 P copper ion import across plasma membrane
4555 O_BomaMG16729_complete:A_BomaMG_comp25365_c0_seq2
177bp
GO:0005375 F copper ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006878 P cellular copper ion homeostasis
GO:0015088 F copper ion transmembrane transporter activity
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
GO:0043025 C neuronal cell body
GO:0055037 C recycling endosome
GO:0072719 P cellular response to cisplatin
GO:1902861 P copper ion import across plasma membrane
4556 O_BomaMG16731_complete:A_BomaMG_comp25365_c0_seq3
177bp
GO:0005375 F copper ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006878 P cellular copper ion homeostasis
GO:0015088 F copper ion transmembrane transporter activity
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
GO:0043025 C neuronal cell body
GO:0055037 C recycling endosome
GO:0072719 P cellular response to cisplatin
GO:1902861 P copper ion import across plasma membrane
4557 O_BomaMG16732_complete:A_BomaMG_comp25365_c0_seq4
177bp
GO:0005375 F copper ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006878 P cellular copper ion homeostasis
GO:0015088 F copper ion transmembrane transporter activity
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
GO:0043025 C neuronal cell body
GO:0055037 C recycling endosome
GO:0072719 P cellular response to cisplatin
GO:1902861 P copper ion import across plasma membrane
4558 O_BomaMG16734_5prime_partial:A_BomaMG_comp25366_c0_seq1
639bp
4559 O_BomaMG16735_internal:A_BomaMG_comp25366_c3_seq1
417bp
4560 O_BomaMG16736_complete:A_BomaMG_comp25366_c4_seq2
322bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0042284 F sphingolipid delta-4 desaturase activity
GO:0046513 P ceramide biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
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