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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4501 O_BomaMG1664_complete:A_BomaMG_comp12660_c0_seq1
263bp
PREDICTED:_ribonuclease_Oy_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0033897 F ribonuclease T2 activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4502 O_BomaMG16650_complete:A_BomaMG_comp25336_c1_seq2
496bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
4503 O_BomaMG16653_complete:A_BomaMG_comp25338_c0_seq1
806bp
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008104 P protein localization
GO:0016320 P endoplasmic reticulum membrane fusion
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030154 P cell differentiation
GO:0031965 C nuclear membrane
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042052 P rhabdomere development
GO:0043186 C P granule
GO:0043523 P regulation of neuron apoptotic process
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045169 C fusome
GO:0045451 P pole plasm oskar mRNA localization
GO:0046598 P positive regulation of viral entry into host cell
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0098586 P cellular response to virus
4504 O_BomaMG16658_complete:A_BomaMG_comp25340_c0_seq1
532bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
4505 O_BomaMG1665_complete:A_BomaMG_comp12662_c0_seq1
857bp
PREDICTED:_E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
4506 O_BomaMG16660_3prime_partial:A_BomaMG_comp25341_c0_seq1
414bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0008280 C cohesin complex
GO:0009314 P response to radiation
GO:0019827 P stem cell population maintenance
GO:0030893 C meiotic cohesin complex
GO:0032876 P negative regulation of DNA endoreduplication
GO:0036033 F mediator complex binding
GO:0042770 P signal transduction in response to DNA damage
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
4507 O_BomaMG16662_internal:A_BomaMG_comp25341_c0_seq2
420bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0008280 C cohesin complex
GO:0009314 P response to radiation
GO:0019827 P stem cell population maintenance
GO:0030893 C meiotic cohesin complex
GO:0032876 P negative regulation of DNA endoreduplication
GO:0036033 F mediator complex binding
GO:0042770 P signal transduction in response to DNA damage
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
4508 O_BomaMG16664_complete:A_BomaMG_comp25342_c0_seq1
102bp
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
4509 O_BomaMG16665_complete:A_BomaMG_comp25342_c0_seq2
102bp
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
4510 O_BomaMG16668_complete:A_BomaMG_comp25344_c0_seq1
384bp
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
4511 O_BomaMG16670_complete:A_BomaMG_comp25346_c2_seq1
120bp
4512 O_BomaMG16672_5prime_partial:A_BomaMG_comp25347_c0_seq1
487bp
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4513 O_BomaMG16675_5prime_partial:A_BomaMG_comp25347_c0_seq2
499bp
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4514 O_BomaMG16678_internal:A_BomaMG_comp25348_c0_seq1
165bp
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
4515 O_BomaMG16679_5prime_partial:A_BomaMG_comp25348_c1_seq1
1229bp
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
4516 O_BomaMG1667_3prime_partial:A_BomaMG_comp12663_c0_seq1
705bp
PREDICTED:_pre-mRNA-splicing_factor_CWC22_homolog_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006909 P phagocytosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
4517 O_BomaMG16680_5prime_partial:A_BomaMG_comp25348_c1_seq2
185bp
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
4518 O_BomaMG16681_complete:A_BomaMG_comp25349_c0_seq1
492bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
4519 O_BomaMG16683_3prime_partial:A_BomaMG_comp25350_c0_seq1
120bp
4520 O_BomaMG16684_internal:A_BomaMG_comp25350_c0_seq2
367bp
4521 O_BomaMG16686_3prime_partial:A_BomaMG_comp25350_c0_seq4
328bp
4522 O_BomaMG16688_complete:A_BomaMG_comp25351_c0_seq2
195bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
4523 O_BomaMG16689_3prime_partial:A_BomaMG_comp25351_c0_seq3
118bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
4524 O_BomaMG1668_complete:A_BomaMG_comp12666_c0_seq1
125bp
histone_H2B-like_protein_[Bombyx_mori]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005811 C lipid droplet
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0046982 F protein heterodimerization activity
4525 O_BomaMG16690_complete:A_BomaMG_comp25352_c0_seq7
253bp
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4526 O_BomaMG16691_5prime_partial:A_BomaMG_comp25352_c2_seq2
338bp
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0007525 P somatic muscle development
GO:0016203 P muscle attachment
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045214 P sarcomere organization
4527 O_BomaMG16692_complete:A_BomaMG_comp25353_c1_seq1
311bp
4528 O_BomaMG16694_complete:A_BomaMG_comp25353_c1_seq2
308bp
4529 O_BomaMG16695_5prime_partial:A_BomaMG_comp25354_c0_seq1
219bp
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009966 P regulation of signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031648 P protein destabilization
GO:0043254 P regulation of protein-containing complex assembly
4530 O_BomaMG16696_3prime_partial:A_BomaMG_comp25355_c0_seq1
112bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0008333 P endosome to lysosome transport
GO:0050811 F GABA receptor binding
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