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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1831 O_BomaMG12629_3prime_partial:A_BomaMG_comp24225_c1_seq1
255bp
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0019233 P sensory perception of pain
GO:0061040 P female gonad morphogenesis
1832 O_BomaMG1262_complete:A_BomaMG_comp12156_c0_seq1
252bp
PREDICTED:_ribosome_maturation_protein_SBDS-like_[Plutella_xylostella]
GO:0000922 C spindle pole
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008283 P cell population proliferation
GO:0019843 F rRNA binding
GO:0030282 P bone mineralization
GO:0030595 P leukocyte chemotaxis
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0048539 P bone marrow development
1833 O_BomaMG12630_complete:A_BomaMG_comp24225_c1_seq2
542bp
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0007548 P sex differentiation
GO:0046660 P female sex differentiation
GO:0048070 P regulation of developmental pigmentation
GO:0048071 P sex-specific pigmentation
GO:0048086 P negative regulation of developmental pigmentation
GO:0048092 P negative regulation of male pigmentation
1834 O_BomaMG12632_3prime_partial:A_BomaMG_comp24226_c0_seq1
942bp
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
1835 O_BomaMG12633_internal:A_BomaMG_comp24227_c0_seq1
675bp
1836 O_BomaMG12635_3prime_partial:A_BomaMG_comp24227_c1_seq1
102bp
1837 O_BomaMG12636_internal:A_BomaMG_comp24228_c0_seq1
546bp
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042995 C cell projection
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0097352 P autophagosome maturation
1838 O_BomaMG12638_5prime_partial:A_BomaMG_comp24229_c0_seq1
339bp
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1839 O_BomaMG12639_5prime_partial:A_BomaMG_comp24229_c0_seq2
340bp
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1840 O_BomaMG1263_complete:A_BomaMG_comp12157_c0_seq1
200bp
PREDICTED:_prisilkin-39-like_isoform_X5_[Papilio_xuthus]
1841 O_BomaMG12640_5prime_partial:A_BomaMG_comp24229_c0_seq3
426bp
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1842 O_BomaMG12641_5prime_partial:A_BomaMG_comp24229_c0_seq4
339bp
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1843 O_BomaMG12642_3prime_partial:A_BomaMG_comp24230_c0_seq1
2581bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
1844 O_BomaMG12643_5prime_partial:A_BomaMG_comp24230_c0_seq1
516bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
1845 O_BomaMG1264_complete:A_BomaMG_comp12160_c0_seq2
376bp
ribonucleoside_diphosphate_reductase_small_subunit_[Bombyx_mori]
GO:0004748 F ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005971 C ribonucleoside-diphosphate reductase complex
GO:0006260 P DNA replication
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0009186 P deoxyribonucleoside diphosphate metabolic process
GO:0009263 P deoxyribonucleotide biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1846 O_BomaMG12650_5prime_partial:A_BomaMG_comp24231_c0_seq1
522bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1847 O_BomaMG12652_complete:A_BomaMG_comp24231_c0_seq3
298bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1848 O_BomaMG12653_complete:A_BomaMG_comp24231_c0_seq3
131bp
1849 O_BomaMG12654_3prime_partial:A_BomaMG_comp24233_c0_seq1
374bp
1850 O_BomaMG12655_5prime_partial:A_BomaMG_comp24233_c0_seq2
238bp
1851 O_BomaMG12656_3prime_partial:A_BomaMG_comp24233_c0_seq4
374bp
1852 O_BomaMG12657_complete:A_BomaMG_comp24234_c0_seq1
550bp
1853 O_BomaMG1265_internal:A_BomaMG_comp12162_c0_seq1
177bp
PREDICTED:_acetyl-CoA_carboxylase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:2001295 P malonyl-CoA biosynthetic process
1854 O_BomaMG12660_3prime_partial:A_BomaMG_comp24235_c4_seq1
214bp
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006826 P iron ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030218 P erythrocyte differentiation
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
1855 O_BomaMG12661_3prime_partial:A_BomaMG_comp24239_c0_seq1
169bp
GO:0004577 F N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
1856 O_BomaMG12662_complete:A_BomaMG_comp24241_c1_seq2
581bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1857 O_BomaMG12663_complete:A_BomaMG_comp24241_c1_seq3
581bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1858 O_BomaMG12664_complete:A_BomaMG_comp24241_c1_seq4
581bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1859 O_BomaMG12665_complete:A_BomaMG_comp24241_c1_seq5
635bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0046040 P IMP metabolic process
GO:0046085 P adenosine metabolic process
GO:0046872 F metal ion binding
1860 O_BomaMG12666_complete:A_BomaMG_comp24241_c1_seq6
599bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
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