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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10381 O_BomaMG25318_internal:A_BomaMG_comp290426_c0_seq1
112bp
10382 O_BomaMG25319_internal:A_BomaMG_comp291387_c0_seq1
115bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001755 P neural crest cell migration
GO:0003007 P heart morphogenesis
GO:0003139 P secondary heart field specification
GO:0003148 P outflow tract septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003203 P endocardial cushion morphogenesis
GO:0003215 P cardiac right ventricle morphogenesis
GO:0003266 P regulation of secondary heart field cardioblast proliferation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0008284 P positive regulation of cell population proliferation
GO:0010468 P regulation of gene expression
GO:0010575 P positive regulation of vascular endothelial growth factor production
GO:0021520 P spinal cord motor neuron cell fate specification
GO:0021522 P spinal cord motor neuron differentiation
GO:0021524 P visceral motor neuron differentiation
GO:0021559 P trigeminal nerve development
GO:0021983 P pituitary gland development
GO:0030182 P neuron differentiation
GO:0031016 P pancreas development
GO:0031290 P retinal ganglion cell axon guidance
GO:0032725 P positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032729 P positive regulation of interferon-gamma production
GO:0032730 P positive regulation of interleukin-1 alpha production
GO:0032731 P positive regulation of interleukin-1 beta production
GO:0032735 P positive regulation of interleukin-12 production
GO:0032755 P positive regulation of interleukin-6 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0035066 P positive regulation of histone acetylation
GO:0042517 P positive regulation of tyrosine phosphorylation of STAT protein
GO:0043388 P positive regulation of DNA binding
GO:0043425 F bHLH transcription factor binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045665 P negative regulation of neuron differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048663 P neuron fate commitment
GO:0048665 P neuron fate specification
GO:0048762 P mesenchymal cell differentiation
GO:0048880 P sensory system development
GO:0048935 P peripheral nervous system neuron development
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0050728 P negative regulation of inflammatory response
GO:0055010 P ventricular cardiac muscle tissue morphogenesis
GO:0060037 P pharyngeal system development
GO:0060379 P cardiac muscle cell myoblast differentiation
GO:0060384 P innervation
GO:0060413 P atrial septum morphogenesis
GO:0060913 P cardiac cell fate determination
GO:0071657 P positive regulation of granulocyte colony-stimulating factor production
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:1901258 P positive regulation of macrophage colony-stimulating factor production
10383 O_BomaMG2531_internal:A_BomaMG_comp14284_c0_seq1
117bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM135A_[Bombyx_mori]
10384 O_BomaMG25320_internal:A_BomaMG_comp291695_c0_seq1
101bp
10385 O_BomaMG25321_internal:A_BomaMG_comp291831_c0_seq1
115bp
10386 O_BomaMG25322_internal:A_BomaMG_comp292892_c0_seq1
148bp
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007229 P integrin-mediated signaling pathway
GO:0008017 F microtubule binding
GO:0010762 P regulation of fibroblast migration
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0030496 C midbody
GO:0031267 F small GTPase binding
GO:0031901 C early endosome membrane
GO:0034260 P negative regulation of GTPase activity
GO:0034506 C chromosome, centromeric core domain
GO:0044822 F RNA binding
GO:0045184 P establishment of protein localization
GO:0048041 P focal adhesion assembly
GO:0048365 F small GTPase binding
GO:0051301 P cell division
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051987 P positive regulation of attachment of spindle microtubules to kinetochore
GO:0072356 P chromosome passenger complex localization to kinetochore
GO:0090630 P activation of GTPase activity
GO:1900025 P negative regulation of substrate adhesion-dependent cell spreading
GO:1900027 P regulation of ruffle assembly
GO:1990023 C mitotic spindle midzone
10387 O_BomaMG25323_internal:A_BomaMG_comp293659_c0_seq1
149bp
GO:0003674 F molecular_function
GO:0005912 C adherens junction
GO:0007163 P establishment or maintenance of cell polarity
GO:0015031 P protein transport
10388 O_BomaMG25325_internal:A_BomaMG_comp296822_c0_seq1
148bp
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
10389 O_BomaMG25327_internal:A_BomaMG_comp297601_c0_seq1
142bp
10390 O_BomaMG25328_internal:A_BomaMG_comp298817_c0_seq1
149bp
GO:0001701 P in utero embryonic development
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006913 P nucleocytoplasmic transport
GO:0007162 P negative regulation of cell adhesion
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008284 P positive regulation of cell population proliferation
GO:0009986 C cell surface
GO:0010820 P positive regulation of T cell chemotaxis
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030307 P positive regulation of cell growth
GO:0030335 P positive regulation of cell migration
GO:0034612 P response to tumor necrosis factor
GO:0042117 P monocyte activation
GO:0042169 F SH2 domain binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0051088 P obsolete PMA-inducible membrane protein ectodomain proteolysis
GO:0051089 P constitutive protein ectodomain proteolysis
GO:0070062 C extracellular exosome
GO:0097038 C perinuclear endoplasmic reticulum
GO:0097197 C tetraspanin-enriched microdomain
10391 O_BomaMG25329_3prime_partial:A_BomaMG_comp298989_c0_seq1
134bp
10392 O_BomaMG2532_internal:A_BomaMG_comp14288_c0_seq1
218bp
MSL2_protein_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0072487 C MSL complex
10393 O_BomaMG25330_internal:A_BomaMG_comp302725_c0_seq1
101bp
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
10394 O_BomaMG25331_internal:A_BomaMG_comp306960_c0_seq1
138bp
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
10395 O_BomaMG25332_internal:A_BomaMG_comp310723_c0_seq1
111bp
10396 O_BomaMG25333_internal:A_BomaMG_comp310941_c0_seq1
140bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0007224 P smoothened signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10397 O_BomaMG25335_5prime_partial:A_BomaMG_comp311110_c0_seq1
110bp
10398 O_BomaMG25336_internal:A_BomaMG_comp311216_c0_seq1
110bp
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090277 P positive regulation of peptide hormone secretion
GO:1904659 P glucose transmembrane transport
10399 O_BomaMG25337_internal:A_BomaMG_comp311304_c0_seq1
133bp
10400 O_BomaMG25338_5prime_partial:A_BomaMG_comp311323_c0_seq1
142bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
10401 O_BomaMG25339_internal:A_BomaMG_comp311670_c0_seq1
103bp
10402 O_BomaMG2533_5prime_partial:A_BomaMG_comp14296_c0_seq1
111bp
PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001764 P neuron migration
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007292 P female gamete generation
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030426 C growth cone
GO:0030509 P BMP signaling pathway
GO:0036459 F thiol-dependent deubiquitinase
GO:0042995 C cell projection
GO:0044267 P cellular protein metabolic process
GO:0048675 P axon extension
GO:0051301 P cell division
GO:0070410 F co-SMAD binding
10403 O_BomaMG25340_internal:A_BomaMG_comp311705_c0_seq1
113bp
GO:0000132 P establishment of mitotic spindle orientation
GO:0003384 P apical constriction involved in gastrulation
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007399 P nervous system development
GO:0008013 F beta-catenin binding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016342 C catenin complex
GO:0016477 P cell migration
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0042074 P cell migration involved in gastrulation
GO:0070097 F delta-catenin binding
10404 O_BomaMG25341_internal:A_BomaMG_comp311743_c0_seq1
112bp
10405 O_BomaMG25342_internal:A_BomaMG_comp311806_c0_seq1
122bp
10406 O_BomaMG25345_internal:A_BomaMG_comp311978_c0_seq1
115bp
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016605 C PML body
GO:0030915 C Smc5-Smc6 complex
GO:0034184 P positive regulation of maintenance of mitotic sister chromatid cohesion
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
GO:0090398 P cellular senescence
10407 O_BomaMG25346_internal:A_BomaMG_comp312139_c0_seq1
103bp
GO:0001523 P retinoid metabolic process
GO:0003281 P ventricular septum development
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030139 C endocytic vesicle
GO:0030900 P forebrain development
GO:0031526 C brush border membrane
GO:0035904 P aorta development
GO:0042359 P vitamin D metabolic process
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
10408 O_BomaMG25347_3prime_partial:A_BomaMG_comp312445_c0_seq1
177bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
10409 O_BomaMG25348_internal:A_BomaMG_comp312450_c0_seq1
130bp
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0001952 P regulation of cell-matrix adhesion
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008017 F microtubule binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010468 P regulation of gene expression
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016525 P negative regulation of angiogenesis
GO:0021510 P spinal cord development
GO:0021764 P amygdala development
GO:0021897 P forebrain astrocyte development
GO:0021915 P neural tube development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0034605 P cellular response to heat
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043407 P negative regulation of MAP kinase activity
GO:0043408 P regulation of MAPK cascade
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043535 P regulation of blood vessel endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046929 P negative regulation of neurotransmitter secretion
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048712 P negative regulation of astrocyte differentiation
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
GO:0050890 P cognition
GO:0061534 P gamma-aminobutyric acid secretion, neurotransmission
GO:0061535 P glutamate secretion, neurotransmission
GO:0098597 P observational learning
GO:0098793 C presynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
10410 O_BomaMG25349_internal:A_BomaMG_comp312579_c0_seq1
117bp
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