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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10351 O_BomaMG25283_internal:A_BomaMG_comp277992_c0_seq1
107bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
10352 O_BomaMG25284_internal:A_BomaMG_comp278103_c0_seq1
139bp
10353 O_BomaMG25287_5prime_partial:A_BomaMG_comp278324_c0_seq1
185bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
10354 O_BomaMG25289_internal:A_BomaMG_comp278411_c0_seq1
119bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10355 O_BomaMG2528_internal:A_BomaMG_comp14263_c0_seq1
229bp
PREDICTED:_dual_serine/threonine_and_tyrosine_protein_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
10356 O_BomaMG25290_internal:A_BomaMG_comp278605_c0_seq1
109bp
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0021999 P neural plate anterior/posterior regionalization
GO:0022407 P regulation of cell-cell adhesion
GO:0048813 P dendrite morphogenesis
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
10357 O_BomaMG25291_3prime_partial:A_BomaMG_comp278761_c0_seq1
224bp
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017060 F 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0036065 P fucosylation
10358 O_BomaMG25292_internal:A_BomaMG_comp279045_c0_seq1
147bp
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015174 F basic amino acid transmembrane transporter activity
GO:0015181 F L-arginine transmembrane transporter activity
GO:0015189 F L-lysine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015802 P basic amino acid transport
GO:0015809 P L-arginine transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032006 P regulation of TOR signaling
GO:1903352 P L-ornithine transmembrane transport
GO:1903401 P L-lysine transmembrane transport
GO:1903826 P L-arginine transmembrane transport
GO:1990822 P basic amino acid transmembrane transport
10359 O_BomaMG25294_internal:A_BomaMG_comp279771_c0_seq1
116bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10360 O_BomaMG25295_internal:A_BomaMG_comp279786_c0_seq1
106bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
10361 O_BomaMG25296_5prime_partial:A_BomaMG_comp280013_c0_seq1
111bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0038061 P NIK/NF-kappaB signaling
GO:0048511 P rhythmic process
10362 O_BomaMG25297_internal:A_BomaMG_comp280074_c0_seq1
103bp
GO:0004177 F aminopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
10363 O_BomaMG25298_internal:A_BomaMG_comp280904_c0_seq1
112bp
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
10364 O_BomaMG25299_internal:A_BomaMG_comp280933_c0_seq1
105bp
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
10365 O_BomaMG2529_5prime_partial:A_BomaMG_comp14265_c0_seq1
141bp
Condensin-2_complex_subunit_D3_[Papilio_machaon]
10366 O_BomaMG252_internal:A_BomaMG_comp2853_c0_seq1
106bp
GO:0004180 F carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10367 O_BomaMG25301_internal:A_BomaMG_comp281036_c0_seq1
120bp
10368 O_BomaMG25302_5prime_partial:A_BomaMG_comp281092_c0_seq1
213bp
GO:0000932 C P-body
GO:0005737 C cytoplasm
10369 O_BomaMG25303_internal:A_BomaMG_comp281154_c0_seq1
140bp
GO:0005388 F P-type calcium transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007603 P phototransduction, visible light
GO:0007608 P sensory perception of smell
GO:0008525 F phosphatidylcholine transporter activity
GO:0008526 F phosphatidylinositol transfer activity
GO:0015914 P phospholipid transport
GO:0016021 C integral component of membrane
GO:0016029 C subrhabdomeral cisterna
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0035091 F phosphatidylinositol binding
GO:0045494 P photoreceptor cell maintenance
GO:0046488 P phosphatidylinositol metabolic process
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0070588 P calcium ion transmembrane transport
GO:0071482 P cellular response to light stimulus
10370 O_BomaMG25305_internal:A_BomaMG_comp282587_c0_seq1
103bp
10371 O_BomaMG25306_internal:A_BomaMG_comp282587_c0_seq1
103bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
10372 O_BomaMG25307_internal:A_BomaMG_comp283069_c0_seq1
112bp
10373 O_BomaMG25309_internal:A_BomaMG_comp284809_c0_seq1
104bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
10374 O_BomaMG2530_5prime_partial:A_BomaMG_comp14275_c1_seq1
176bp
PREDICTED:_protein_groucho-like_isoform_X7_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
10375 O_BomaMG25311_internal:A_BomaMG_comp285005_c0_seq1
115bp
10376 O_BomaMG25312_internal:A_BomaMG_comp285584_c0_seq1
135bp
10377 O_BomaMG25314_internal:A_BomaMG_comp286009_c0_seq1
103bp
10378 O_BomaMG25315_internal:A_BomaMG_comp286873_c0_seq1
107bp
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
10379 O_BomaMG25316_internal:A_BomaMG_comp288010_c0_seq1
166bp
10380 O_BomaMG25317_internal:A_BomaMG_comp290099_c0_seq1
149bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
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