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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

1021

O_BomaMG11437_complete:A_BomaMG_comp23753_c0_seq1

457bp

GO:0003824	F	catalytic activity
GO:0004421	F	hydroxymethylglutaryl-CoA synthase activity
GO:0006629	P	lipid metabolic process
GO:0006694	P	steroid biosynthetic process
GO:0008152	P	metabolic process
GO:0008202	P	steroid metabolic process
GO:0008299	P	isoprenoid biosynthetic process
GO:0016126	P	sterol biosynthetic process
GO:0016740	F	transferase activity

1022

O_BomaMG11438_3prime_partial:A_BomaMG_comp23754_c0_seq1

455bp

GO:0000049	F	tRNA binding
GO:0000166	F	nucleotide binding
GO:0003723	F	RNA binding
GO:0004812	F	aminoacyl-tRNA ligase activity
GO:0004825	F	methionine-tRNA ligase activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0006412	P	translation
GO:0006418	P	tRNA aminoacylation for protein translation
GO:0006431	P	methionyl-tRNA aminoacylation
GO:0016874	F	ligase activity

1023

O_BomaMG11440_complete:A_BomaMG_comp23755_c0_seq1

734bp

GO:0005737

cytoplasm

1024

O_BomaMG11441_complete:A_BomaMG_comp23755_c0_seq2

591bp

GO:0003779	F	actin binding
GO:0005089	F	guanyl-nucleotide exchange factor activity
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0007266	P	Rho protein signal transduction
GO:0030676	F	guanyl-nucleotide exchange factor activity
GO:0031982	C	vesicle
GO:0032587	C	ruffle membrane
GO:0035023	P	regulation of Rho protein signal transduction
GO:0043234	C	protein-containing complex
GO:0043547	P	positive regulation of GTPase activity
GO:0070062	C	extracellular exosome
GO:1900029	P	positive regulation of ruffle assembly

1025

O_BomaMG11442_complete:A_BomaMG_comp23755_c0_seq3

544bp

GO:0001726	C	ruffle
GO:0003779	F	actin binding
GO:0005089	F	guanyl-nucleotide exchange factor activity
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0007266	P	Rho protein signal transduction
GO:0016601	P	Rac protein signal transduction
GO:0030676	F	guanyl-nucleotide exchange factor activity
GO:0031982	C	vesicle
GO:0032587	C	ruffle membrane
GO:0035023	P	regulation of Rho protein signal transduction
GO:0043234	C	protein-containing complex
GO:0043547	P	positive regulation of GTPase activity
GO:0051015	F	actin filament binding
GO:0070062	C	extracellular exosome
GO:1900029	P	positive regulation of ruffle assembly

1026

O_BomaMG11443_complete:A_BomaMG_comp23755_c0_seq4

781bp

GO:0005737

cytoplasm

1027

O_BomaMG11444_complete:A_BomaMG_comp23755_c0_seq5

781bp

GO:0005737

cytoplasm

1028

O_BomaMG11445_complete:A_BomaMG_comp23755_c0_seq6

734bp

GO:0005737

cytoplasm

1029

O_BomaMG11446_complete:A_BomaMG_comp23756_c0_seq1

410bp

GO:0000165	P	MAPK cascade
GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004702	F	obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006468	P	protein phosphorylation
GO:0006915	P	apoptotic process
GO:0007254	P	JNK cascade
GO:0007257	P	obsolete activation of JUN kinase activity
GO:0009611	P	response to wounding
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0034393	P	positive regulation of smooth muscle cell apoptotic process
GO:0071260	P	cellular response to mechanical stimulus
GO:2000672	P	negative regulation of motor neuron apoptotic process

1030

O_BomaMG11447_complete:A_BomaMG_comp23758_c0_seq1

1209bp

1031

O_BomaMG11448_complete:A_BomaMG_comp23758_c0_seq1

395bp

1032

O_BomaMG11449_complete:A_BomaMG_comp23758_c0_seq1

176bp

1033

O_BomaMG11450_complete:A_BomaMG_comp23760_c0_seq1

455bp

GO:0003824	F	catalytic activity
GO:0004123	F	cystathionine gamma-lyase activity
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005875	C	microtubule associated complex
GO:0006523	P	alanine biosynthetic process
GO:0016226	P	iron-sulfur cluster assembly
GO:0016740	F	transferase activity
GO:0030170	F	pyridoxal phosphate binding
GO:0031071	F	cysteine desulfurase activity
GO:0044571	P	[2Fe-2S] cluster assembly
GO:0046872	F	metal ion binding
GO:0051536	F	iron-sulfur cluster binding

1034

O_BomaMG11451_complete:A_BomaMG_comp23761_c0_seq1

210bp

GO:0004322	F	ferroxidase activity
GO:0005576	C	extracellular region
GO:0005623	C	obsolete cell
GO:0006826	P	iron ion transport
GO:0006879	P	cellular iron ion homeostasis
GO:0008199	F	ferric iron binding
GO:0016491	F	oxidoreductase activity
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

1035

O_BomaMG11452_3prime_partial:A_BomaMG_comp23763_c0_seq1

144bp

1036

O_BomaMG11453_3prime_partial:A_BomaMG_comp23763_c1_seq2

166bp

GO:0002230	P	positive regulation of defense response to virus by host
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding
GO:0098792	P	xenophagy

1037

O_BomaMG11454_5prime_partial:A_BomaMG_comp23763_c1_seq2

134bp

1038

O_BomaMG11455_complete:A_BomaMG_comp23764_c0_seq1

304bp

GO:0000813	C	ESCRT I complex
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005813	C	centrosome
GO:0006810	P	transport
GO:0006914	P	autophagy
GO:0010008	C	endosome membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016197	P	endosomal transport
GO:0019058	P	viral life cycle
GO:0031902	C	late endosome membrane
GO:0036258	P	multivesicular body assembly
GO:0039702	P	viral budding via host ESCRT complex
GO:0043162	P	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231	C	intracellular membrane-bounded organelle
GO:0075733	P	intracellular transport of virus

1039

O_BomaMG11456_complete:A_BomaMG_comp23766_c0_seq1

522bp

GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006814	P	sodium ion transport
GO:0006820	P	anion transport
GO:0015114	F	phosphate ion transmembrane transporter activity
GO:0015293	F	symporter activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022857	F	transmembrane transporter activity
GO:0035435	P	phosphate ion transmembrane transport
GO:0055085	P	transmembrane transport

1040

O_BomaMG11457_complete:A_BomaMG_comp23766_c0_seq2

520bp

GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006814	P	sodium ion transport
GO:0006820	P	anion transport
GO:0015114	F	phosphate ion transmembrane transporter activity
GO:0015293	F	symporter activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022857	F	transmembrane transporter activity
GO:0035435	P	phosphate ion transmembrane transport
GO:0055085	P	transmembrane transport

1041

O_BomaMG11458_5prime_partial:A_BomaMG_comp23767_c0_seq1

613bp

GO:0005811	C	lipid droplet
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity
GO:0016884	F	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064	F	fatty acid amide hydrolase activity
GO:0019369	P	arachidonic acid metabolic process

1042

O_BomaMG11459_5prime_partial:A_BomaMG_comp23768_c0_seq1

680bp

GO:0005576	C	extracellular region
GO:0005578	C	extracellular matrix
GO:0005886	C	plasma membrane
GO:0006887	P	exocytosis
GO:0007049	P	cell cycle
GO:0016020	C	membrane

1043

O_BomaMG1145_internal:A_BomaMG_comp11988_c0_seq1

138bp

PREDICTED:_ral_GTPase-activating_protein_subunit_beta_[Papilio_polytes]

GO:0005096	F	GTPase activator activity
GO:0046982	F	protein heterodimerization activity
GO:0051056	P	regulation of small GTPase mediated signal transduction
GO:0090630	P	activation of GTPase activity

1044

O_BomaMG11462_5prime_partial:A_BomaMG_comp23768_c0_seq2

682bp

GO:0005576	C	extracellular region
GO:0005578	C	extracellular matrix
GO:0005886	C	plasma membrane
GO:0006887	P	exocytosis
GO:0007049	P	cell cycle
GO:0016020	C	membrane

1045

O_BomaMG11465_5prime_partial:A_BomaMG_comp23768_c0_seq4

713bp

GO:0005576	C	extracellular region
GO:0005578	C	extracellular matrix
GO:0005886	C	plasma membrane
GO:0006887	P	exocytosis
GO:0007049	P	cell cycle
GO:0016020	C	membrane

1046

O_BomaMG11468_5prime_partial:A_BomaMG_comp23768_c0_seq6

681bp

GO:0005576	C	extracellular region
GO:0005578	C	extracellular matrix
GO:0005886	C	plasma membrane
GO:0006887	P	exocytosis
GO:0007049	P	cell cycle
GO:0016020	C	membrane

1047

O_BomaMG1146_5prime_partial:A_BomaMG_comp11992_c0_seq1

1212bp

nucleotide_excision_repair_protein_[Bombyx_mori]

GO:0000111	C	nucleotide-excision repair factor 2 complex
GO:0003677	F	DNA binding
GO:0003684	F	damaged DNA binding
GO:0003697	F	single-stranded DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006281	P	DNA repair
GO:0006289	P	nucleotide-excision repair
GO:0006974	P	cellular response to DNA damage stimulus
GO:0010777	P	meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942	C	XPC complex

1048

O_BomaMG11471_3prime_partial:A_BomaMG_comp23769_c0_seq1

146bp

GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0008168	F	methyltransferase activity
GO:0016740	F	transferase activity
GO:0030735	F	carnosine N-methyltransferase activity
GO:0032259	P	methylation
GO:0035498	P	carnosine metabolic process

1049

O_BomaMG11472_5prime_partial:A_BomaMG_comp23769_c1_seq1

249bp

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0008150	P	biological_process
GO:0008168	F	methyltransferase activity
GO:0016740	F	transferase activity
GO:0030735	F	carnosine N-methyltransferase activity
GO:0032259	P	methylation
GO:0035498	P	carnosine metabolic process

1050

O_BomaMG11474_complete:A_BomaMG_comp23772_c0_seq1

266bp

GO:0000139	C	Golgi membrane
GO:0000421	C	autophagosome membrane
GO:0005484	F	SNAP receptor activity
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005794	C	Golgi apparatus
GO:0005886	C	plasma membrane
GO:0005929	C	cilium
GO:0006810	P	transport
GO:0006914	P	autophagy
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016082	P	synaptic vesicle priming
GO:0019905	F	syntaxin binding
GO:0020018	C	ciliary pocket membrane
GO:0030030	P	cell projection organization
GO:0031201	C	SNARE complex
GO:0031410	C	cytoplasmic vesicle
GO:0031629	P	synaptic vesicle fusion to presynaptic active zone membrane
GO:0042384	P	cilium assembly
GO:0042995	C	cell projection
GO:0043195	C	terminal bouton
GO:0060170	C	ciliary membrane
GO:0097352	P	autophagosome maturation

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SilkBase

Search ORF from Assembled RNA-Seq

Bombyx mori

Bombyx mandarina

Trilocha varians

Ernolatia moorei

Samia ricini

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