Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3241	O_BomaASG12918_complete:A_BomaASG_c29999_g1_i4 126bp
3242	O_BomaASG12919_complete:A_BomaASG_c29999_g1_i4 100bp
3243	O_BomaASG1291_complete:A_BomaASG_c9145_g1_i1 269bp		ribosomal_protein_L7A_[Bombyx_mori]	GO:0000022 P mitotic spindle elongation GO:0003735 F structural constituent of ribosome GO:0005840 C ribosome GO:0006412 P translation GO:0007052 P mitotic spindle organization GO:0022625 C cytosolic large ribosomal subunit GO:0030529 C ribonucleoprotein complex GO:0042254 P ribosome biogenesis GO:0051297 P centrosome cycle GO:0051298 P centrosome duplication
3244	O_BomaASG12920_5prime_partial:A_BomaASG_c30000_g1_i1 290bp
3245	O_BomaASG12921_3prime_partial:A_BomaASG_c30000_g1_i1 250bp		F-box/LRR-repeat_protein_20_[Bombyx_mori]	GO:0005737 C cytoplasm
3246	O_BomaASG12922_5prime_partial:A_BomaASG_c30000_g1_i2 280bp
3247	O_BomaASG12923_3prime_partial:A_BomaASG_c30000_g1_i2 241bp		F-box/LRR-repeat_protein_20_[Bombyx_mori]	GO:0005737 C cytoplasm
3248	O_BomaASG12924_5prime_partial:A_BomaASG_c30003_g1_i2 247bp		FAST_kinase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006468 P protein phosphorylation GO:0006915 P apoptotic process GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016607 C nuclear speck GO:0016740 F transferase activity GO:0033867 F Fas-activated serine/threonine kinase activity GO:0043484 P regulation of RNA splicing
3249	O_BomaASG12925_internal:A_BomaASG_c30004_g1_i1 276bp		mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0003712 F transcription coregulator activity GO:0003713 F transcription coactivator activity GO:0004872 F signaling receptor activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0016020 C membrane GO:0016592 C mediator complex GO:0030518 P intracellular steroid hormone receptor signaling pathway GO:0030521 P androgen receptor signaling pathway GO:0042632 P cholesterol homeostasis GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046966 F thyroid hormone receptor binding GO:0070328 P triglyceride homeostasis GO:1904168 P negative regulation of DNA-binding transcription factor activity
3250	O_BomaASG12926_5prime_partial:A_BomaASG_c30004_g1_i1 145bp
3251	O_BomaASG12927_internal:A_BomaASG_c30004_g1_i2 395bp		mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006508 P proteolysis GO:0007275 P multicellular organism development GO:0007526 P larval somatic muscle development GO:0016592 C mediator complex GO:0022416 P chaeta development GO:0030177 P positive regulation of Wnt signaling pathway GO:0036011 P imaginal disc-derived leg segmentation GO:0045165 P cell fate commitment GO:0045498 P sex comb development GO:0048190 P wing disc dorsal/ventral pattern formation GO:0048749 P compound eye development GO:0070847 C core mediator complex
3252	O_BomaASG12928_5prime_partial:A_BomaASG_c30004_g1_i2 145bp
3253	O_BomaASG12929_internal:A_BomaASG_c30005_g1_i1 111bp		aladin_[Bombyx_mori]
3254	O_BomaASG1292_3prime_partial:A_BomaASG_c9145_g1_i1 206bp			GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
3255	O_BomaASG12930_3prime_partial:A_BomaASG_c30005_g1_i2 155bp		aladin_[Bombyx_mori]
3256	O_BomaASG12931_5prime_partial:A_BomaASG_c30006_g1_i1 210bp		neurogenic_protein_mastermind_[Bombyx_mori]
3257	O_BomaASG12932_5prime_partial:A_BomaASG_c30006_g1_i1 187bp
3258	O_BomaASG12933_3prime_partial:A_BomaASG_c30008_g1_i1 290bp		uncharacterized_protein_LOC101741811_[Bombyx_mori]	GO:0001682 P tRNA 5'-leader removal GO:0004526 F ribonuclease P activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005655 C nucleolar ribonuclease P complex GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0008033 P tRNA processing GO:0016787 F hydrolase activity GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3259	O_BomaASG12934_5prime_partial:A_BomaASG_c30012_g1_i1 108bp
3260	O_BomaASG12935_5prime_partial:A_BomaASG_c30012_g1_i3 108bp
3261	O_BomaASG12936_internal:A_BomaASG_c30013_g1_i1 279bp		uncharacterized_protein_LOC101744402_[Bombyx_mori]
3262	O_BomaASG12937_complete:A_BomaASG_c30014_g1_i1 375bp		Cysteine-rich_with_EGF-like_domain_protein_2_[Operophtera_brumata]	GO:0005509 F calcium ion binding GO:0005576 C extracellular region GO:0005783 C endoplasmic reticulum
3263	O_BomaASG12938_3prime_partial:A_BomaASG_c30016_g1_i1 437bp		MAP_kinase-interacting_serine/threonine-protein_kinase_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004683 F calmodulin-dependent protein kinase activity GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006468 P protein phosphorylation GO:0009931 F calcium-dependent protein serine/threonine kinase activity GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018105 P peptidyl-serine phosphorylation GO:0035556 P intracellular signal transduction GO:0046777 P protein autophosphorylation
3264	O_BomaASG12939_3prime_partial:A_BomaASG_c30017_g1_i1 332bp		phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]	GO:0003713 F transcription coactivator activity GO:0005634 C nucleus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0008195 F phosphatidate phosphatase activity GO:0009062 P fatty acid catabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0019432 P triglyceride biosynthetic process GO:0045944 P positive regulation of transcription by RNA polymerase II
3265	O_BomaASG1293_complete:A_BomaASG_c9146_g1_i1 400bp		protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]	GO:0000266 P mitochondrial fission GO:0004129 F cytochrome-c oxidase activity GO:0004311 F farnesyltranstransferase activity GO:0004659 F prenyltransferase activity GO:0005739 C mitochondrion GO:0006783 P heme biosynthetic process GO:0006784 P heme A biosynthetic process GO:0007005 P mitochondrion organization GO:0008495 F protoheme IX farnesyltransferase activity GO:0008535 P respiratory chain complex IV assembly GO:0009060 P aerobic respiration GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0017004 P cytochrome complex assembly GO:0018343 P protein farnesylation GO:0031966 C mitochondrial membrane GO:0045333 P cellular respiration GO:0048034 P heme O biosynthetic process GO:0070069 C cytochrome complex GO:1902600 P proton transmembrane transport
3266	O_BomaASG12940_internal:A_BomaASG_c30017_g1_i2 113bp		phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]
3267	O_BomaASG12941_3prime_partial:A_BomaASG_c30017_g1_i3 332bp		phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]	GO:0003713 F transcription coactivator activity GO:0005634 C nucleus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0008195 F phosphatidate phosphatase activity GO:0009062 P fatty acid catabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0019432 P triglyceride biosynthetic process GO:0045944 P positive regulation of transcription by RNA polymerase II
3268	O_BomaASG12942_3prime_partial:A_BomaASG_c30017_g1_i3 100bp
3269	O_BomaASG12943_complete:A_BomaASG_c30018_g1_i1 658bp		RUN_and_FYVE_domain-containing_protein_2_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0046872 F metal ion binding
3270	O_BomaASG12944_complete:A_BomaASG_c30018_g1_i1 135bp