Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2761	O_BomaASG12486_complete:A_BomaASG_c29738_g3_i2 697bp		prestin_isoform_X2_[Bombyx_mori]	GO:0002931 P response to ischemia GO:0005254 F chloride channel activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007605 P sensory perception of sound GO:0008134 F transcription factor binding GO:0008271 F secondary active sulfate transmembrane transporter activity GO:0008272 P sulfate transport GO:0008360 P regulation of cell shape GO:0009751 P response to salicylic acid GO:0010996 P response to auditory stimulus GO:0015106 F bicarbonate transmembrane transporter activity GO:0015116 F sulfate transmembrane transporter activity GO:0015301 F anion:anion antiporter activity GO:0015701 P bicarbonate transport GO:0015755 P fructose transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:0016328 C lateral plasma membrane GO:0019531 F oxalate transmembrane transporter activity GO:0019532 P oxalate transport GO:0030507 F spectrin binding GO:0034220 P ion transmembrane transport GO:0034766 P negative regulation of ion transmembrane transport GO:0035864 P response to potassium ion GO:0042391 P regulation of membrane potential GO:0042493 P response to xenobiotic stimulus GO:0042803 F protein homodimerization activity GO:0045793 P positive regulation of cell size GO:0051262 P protein tetramerization GO:0051453 P regulation of intracellular pH GO:0055085 P transmembrane transport GO:0090102 P cochlea development GO:0097066 P response to thyroid hormone GO:0098656 P anion transmembrane transport GO:1902074 P response to salt GO:1902358 P sulfate transmembrane transport GO:1902476 P chloride transmembrane transport GO:2000147 P positive regulation of cell motility
2762	O_BomaASG12487_complete:A_BomaASG_c29738_g3_i2 112bp
2763	O_BomaASG12488_complete:A_BomaASG_c29738_g3_i2 107bp
2764	O_BomaASG12489_3prime_partial:A_BomaASG_c29740_g1_i2 420bp		oocyte_zinc_finger_protein_XlCOF6_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
2765	O_BomaASG1248_internal:A_BomaASG_c8985_g1_i1 111bp
2766	O_BomaASG12490_internal:A_BomaASG_c29744_g1_i1 317bp		myosin-G_heavy_chain-like_[Bombyx_mori]
2767	O_BomaASG12491_5prime_partial:A_BomaASG_c29744_g1_i1 172bp
2768	O_BomaASG12492_complete:A_BomaASG_c29747_g1_i1 209bp		uncharacterized_protein_LOC101746869_[Bombyx_mori]	GO:0005515 F protein binding
2769	O_BomaASG12493_complete:A_BomaASG_c29748_g1_i1 113bp
2770	O_BomaASG12494_complete:A_BomaASG_c29750_g1_i1 366bp		UDP-N-acetylglucosamine_transporter_isoform_X2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005351 F carbohydrate:proton symporter activity GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015788 P UDP-N-acetylglucosamine transmembrane transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2771	O_BomaASG12495_complete:A_BomaASG_c29750_g1_i2 119bp		UDP-N-acetylglucosamine_transporter_isoform_X2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005351 F carbohydrate:proton symporter activity GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015788 P UDP-N-acetylglucosamine transmembrane transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2772	O_BomaASG12496_3prime_partial:A_BomaASG_c29752_g1_i1 186bp		endonuclease-reverse_transcriptase_[Bombyx_mori]	GO:0003964 F RNA-directed DNA polymerase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2773	O_BomaASG12497_complete:A_BomaASG_c29753_g1_i1 176bp
2774	O_BomaASG12498_3prime_partial:A_BomaASG_c29753_g1_i3 281bp		ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0008152 P metabolic process GO:0016829 F lyase activity GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
2775	O_BomaASG12499_complete:A_BomaASG_c29753_g1_i3 184bp
2776	O_BomaASG1249_5prime_partial:A_BomaASG_c8986_g1_i1 109bp		PREDICTED:_uncharacterized_protein_LOC108764239_[Trachymyrmex_cornetzi]
2777	O_BomaASG124_complete:A_BomaASG_c782_g1_i1 223bp		elongation_factor_1-beta'_[Bombyx_mori]	GO:0003746 F translation elongation factor activity GO:0005853 C eukaryotic translation elongation factor 1 complex GO:0006412 P translation GO:0006414 P translational elongation
2778	O_BomaASG12500_5prime_partial:A_BomaASG_c29755_g1_i1 324bp		DET1_homolog_[Bombyx_mori]	GO:0005634 C nucleus
2779	O_BomaASG12501_internal:A_BomaASG_c29757_g1_i1 419bp		ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
2780	O_BomaASG12502_complete:A_BomaASG_c29757_g1_i2 450bp		ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
2781	O_BomaASG12503_internal:A_BomaASG_c29757_g1_i3 442bp		ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
2782	O_BomaASG12504_3prime_partial:A_BomaASG_c29757_g1_i4 657bp		ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
2783	O_BomaASG12505_3prime_partial:A_BomaASG_c29759_g1_i1 501bp		protein_KRI1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2784	O_BomaASG12506_5prime_partial:A_BomaASG_c29759_g1_i1 284bp
2785	O_BomaASG12507_complete:A_BomaASG_c29759_g1_i3 762bp		protein_KRI1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2786	O_BomaASG12508_complete:A_BomaASG_c29759_g1_i3 116bp
2787	O_BomaASG12509_5prime_partial:A_BomaASG_c29761_g1_i1 162bp		PREDICTED:_E3_ubiquitin-protein_ligase_BRE1-like_[Amyelois_transitella]	GO:0003677 F DNA binding GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008134 F transcription factor binding GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016605 C PML body GO:0016874 F ligase activity GO:0031491 F nucleosome binding GO:0032184 F SUMO polymer binding GO:0033234 P negative regulation of protein sumoylation GO:0033768 C SUMO-targeted ubiquitin ligase complex GO:0042802 F identical protein binding GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046685 P response to arsenic-containing substance GO:0046872 F metal ion binding GO:0051865 P protein autoubiquitination GO:0061630 F ubiquitin protein ligase activity GO:0070534 P protein K63-linked ubiquitination GO:0070936 P protein K48-linked ubiquitination GO:0070979 P protein K11-linked ubiquitination GO:0085020 P protein K6-linked ubiquitination GO:0090169 P regulation of spindle assembly GO:0090234 P regulation of kinetochore assembly
2788	O_BomaASG1250_internal:A_BomaASG_c8988_g1_i1 180bp		uncharacterized_protein_LOC101739918_isoform_X1_[Bombyx_mori]	GO:0005515 F protein binding
2789	O_BomaASG12510_3prime_partial:A_BomaASG_c29762_g1_i1 249bp		beta-1-syntrophin_[Bombyx_mori]	GO:0003779 F actin binding GO:0005198 F structural molecule activity GO:0005515 F protein binding GO:0005516 F calmodulin binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0016020 C membrane GO:0030054 C cell junction GO:0030165 F PDZ domain binding GO:0042383 C sarcolemma GO:0043234 C protein-containing complex GO:0045202 C synapse
2790	O_BomaASG12511_complete:A_BomaASG_c29762_g1_i1 139bp		unnamed_protein_product_[Homo_sapiens]