Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2731	O_BomaASG12459_5prime_partial:A_BomaASG_c29720_g1_i2 209bp
2732	O_BomaASG1245_complete:A_BomaASG_c8983_g1_i1 112bp		hypothetical_protein_CI238_11418,_partial_[Colletotrichum_incanum]
2733	O_BomaASG12460_internal:A_BomaASG_c29720_g1_i3 164bp
2734	O_BomaASG12461_internal:A_BomaASG_c29720_g1_i3 164bp		uncharacterized_protein_LOC101742695_[Bombyx_mori]
2735	O_BomaASG12462_5prime_partial:A_BomaASG_c29720_g1_i3 123bp
2736	O_BomaASG12463_5prime_partial:A_BomaASG_c29721_g1_i1 178bp		clip_domain_serine_protease_11_precursor_[Bombyx_mori]	GO:0004252 F serine-type endopeptidase activity GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008236 F serine-type peptidase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity
2737	O_BomaASG12464_complete:A_BomaASG_c29721_g1_i1 112bp
2738	O_BomaASG12465_5prime_partial:A_BomaASG_c29721_g1_i2 281bp		clip_domain_serine_protease_11_precursor_[Bombyx_mori]	GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005576 C extracellular region GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008236 F serine-type peptidase activity GO:0016787 F hydrolase activity
2739	O_BomaASG12466_complete:A_BomaASG_c29721_g1_i2 112bp
2740	O_BomaASG12467_5prime_partial:A_BomaASG_c29722_g1_i1 170bp		protein_DGCR14_homolog_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0005634 C nucleus GO:0007399 P nervous system development GO:0071013 C catalytic step 2 spliceosome
2741	O_BomaASG12468_5prime_partial:A_BomaASG_c29722_g1_i1 121bp
2742	O_BomaASG12469_5prime_partial:A_BomaASG_c29724_g1_i1 211bp		GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
2743	O_BomaASG1246_complete:A_BomaASG_c8983_g1_i1 109bp		cytochrome_C,_partial_[Acinetobacter_baumannii]	GO:0005739 C mitochondrion GO:0005758 C mitochondrial intermembrane space GO:0009055 F electron transfer activity GO:0020037 F heme binding GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process GO:0070469 C respirasome
2744	O_BomaASG12470_complete:A_BomaASG_c29725_g1_i1 219bp		protein_canopy_4_[Bombyx_mori]	GO:0005576 C extracellular region
2745	O_BomaASG12471_internal:A_BomaASG_c29726_g1_i1 211bp		uncharacterized_protein_LOC110385214_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0000784 C chromosome, telomeric region GO:0001756 P somitogenesis GO:0001933 P negative regulation of protein phosphorylation GO:0002326 P B cell lineage commitment GO:0002328 P pro-B cell differentiation GO:0002360 P T cell lineage commitment GO:0002377 P immunoglobulin production GO:0002638 P negative regulation of immunoglobulin production GO:0002684 P positive regulation of immune system process GO:0003677 F DNA binding GO:0003690 F double-stranded DNA binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004677 F DNA-dependent protein kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005667 C transcription regulator complex GO:0005730 C nucleolus GO:0005829 C cytosol GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex GO:0006281 P DNA repair GO:0006302 P double-strand break repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006310 P DNA recombination GO:0006464 P cellular protein modification process GO:0006974 P cellular response to DNA damage stimulus GO:0007420 P brain development GO:0007507 P heart development GO:0008134 F transcription factor binding GO:0008283 P cell population proliferation GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage GO:0010212 P response to ionizing radiation GO:0010332 P response to gamma radiation GO:0014823 P response to activity GO:0016020 C membrane GO:0016233 P telomere capping GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016773 F phosphotransferase activity, alcohol group as acceptor GO:0018105 P peptidyl-serine phosphorylation GO:0019899 F enzyme binding GO:0030098 P lymphocyte differentiation GO:0031648 P protein destabilization GO:0032481 P positive regulation of type I interferon production GO:0032869 P cellular response to insulin stimulus GO:0033077 P T cell differentiation in thymus GO:0033151 P V(D)J recombination GO:0033152 P immunoglobulin V(D)J recombination GO:0033153 P T cell receptor V(D)J recombination GO:0035234 P ectopic germ cell programmed cell death GO:0042752 P regulation of circadian rhythm GO:0043065 P positive regulation of apoptotic process GO:0043066 P negative regulation of apoptotic process GO:0044822 F RNA binding GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048146 P positive regulation of fibroblast proliferation GO:0048511 P rhythmic process GO:0048536 P spleen development GO:0048538 P thymus development GO:0048639 P positive regulation of developmental growth GO:0048660 P regulation of smooth muscle cell proliferation GO:0070419 C nonhomologous end joining complex GO:0072431 P mitotic G1 DNA damage checkpoint signaling GO:0097681 P double-strand break repair via alternative nonhomologous end joining GO:2000773 P negative regulation of cellular senescence GO:2001229 P negative regulation of response to gamma radiation
2746	O_BomaASG12472_complete:A_BomaASG_c29726_g1_i1 141bp
2747	O_BomaASG12473_5prime_partial:A_BomaASG_c29727_g1_i1 152bp		heparin_sulfate_O-sulfotransferase_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0004394 F heparan sulfate 2-O-sulfotransferase activity GO:0005794 C Golgi apparatus GO:0007165 P signal transduction GO:0007424 P open tracheal system development GO:0008146 F sulfotransferase activity GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity
2748	O_BomaASG12474_complete:A_BomaASG_c29727_g1_i2 340bp		heparin_sulfate_O-sulfotransferase_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0004394 F heparan sulfate 2-O-sulfotransferase activity GO:0005794 C Golgi apparatus GO:0007165 P signal transduction GO:0007424 P open tracheal system development GO:0008146 F sulfotransferase activity GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity
2749	O_BomaASG12475_internal:A_BomaASG_c29730_g1_i1 220bp		protein_kibra_isoform_X2_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016020 C membrane GO:0016324 C apical plasma membrane GO:0035330 P regulation of hippo signaling
2750	O_BomaASG12476_internal:A_BomaASG_c29734_g1_i1 285bp		GTPase-activating_protein_CdGAPr_[Bombyx_mori]
2751	O_BomaASG12477_internal:A_BomaASG_c29734_g1_i2 401bp		GTPase-activating_protein_CdGAPr_[Bombyx_mori]
2752	O_BomaASG12478_3prime_partial:A_BomaASG_c29734_g1_i2 151bp
2753	O_BomaASG12479_complete:A_BomaASG_c29734_g1_i2 114bp
2754	O_BomaASG1247_internal:A_BomaASG_c8985_g1_i1 111bp		chloride_channel_protein_2_isoform_X2_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005244 F voltage-gated ion channel activity GO:0005247 F voltage-gated chloride channel activity GO:0005254 F chloride channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0006821 P chloride transport GO:0015629 C actin cytoskeleton GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport GO:0034707 C chloride channel complex GO:0034765 P regulation of ion transmembrane transport GO:0055085 P transmembrane transport GO:1902476 P chloride transmembrane transport GO:1903959 P regulation of anion transmembrane transport
2755	O_BomaASG12480_3prime_partial:A_BomaASG_c29735_g1_i1 277bp		NAD-dependent_protein_deacylase_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005758 C mitochondrial intermembrane space GO:0005759 C mitochondrial matrix GO:0005829 C cytosol GO:0006476 P protein deacetylation GO:0008270 F zinc ion binding GO:0010566 P regulation of ketone biosynthetic process GO:0016787 F hydrolase activity GO:0036046 P protein demalonylation GO:0036047 P peptidyl-lysine demalonylation GO:0036048 P protein desuccinylation GO:0036049 P peptidyl-lysine desuccinylation GO:0036054 F protein-malonyllysine demalonylase activity GO:0036055 F protein-succinyllysine desuccinylase activity GO:0046872 F metal ion binding GO:0061697 F protein-glutaryllysine deglutarylase activity GO:0061698 P protein deglutarylation GO:0061699 P peptidyl-lysine deglutarylation GO:0070403 F NAD+ binding GO:2000378 P negative regulation of reactive oxygen species metabolic process
2756	O_BomaASG12481_internal:A_BomaASG_c29735_g1_i2 117bp		NAD-dependent_protein_deacylase_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005829 C cytosol GO:0006476 P protein deacetylation GO:0008270 F zinc ion binding GO:0010566 P regulation of ketone biosynthetic process GO:0016787 F hydrolase activity GO:0036047 P peptidyl-lysine demalonylation GO:0036048 P protein desuccinylation GO:0036049 P peptidyl-lysine desuccinylation GO:0036054 F protein-malonyllysine demalonylase activity GO:0036055 F protein-succinyllysine desuccinylase activity GO:0046872 F metal ion binding GO:0070403 F NAD+ binding
2757	O_BomaASG12482_5prime_partial:A_BomaASG_c29737_g1_i1 658bp		protein_SMG5_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0031625 F ubiquitin protein ligase binding GO:0032204 P regulation of telomere maintenance GO:0035303 P regulation of dephosphorylation GO:0042162 F telomeric DNA binding GO:0042826 F histone deacetylase binding GO:0051721 F protein phosphatase 2A binding GO:0070182 F DNA polymerase binding
2758	O_BomaASG12483_complete:A_BomaASG_c29738_g3_i1 697bp		prestin_isoform_X2_[Bombyx_mori]	GO:0002931 P response to ischemia GO:0005254 F chloride channel activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007605 P sensory perception of sound GO:0008134 F transcription factor binding GO:0008271 F secondary active sulfate transmembrane transporter activity GO:0008272 P sulfate transport GO:0008360 P regulation of cell shape GO:0009751 P response to salicylic acid GO:0010996 P response to auditory stimulus GO:0015106 F bicarbonate transmembrane transporter activity GO:0015116 F sulfate transmembrane transporter activity GO:0015301 F anion:anion antiporter activity GO:0015701 P bicarbonate transport GO:0015755 P fructose transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:0016328 C lateral plasma membrane GO:0019531 F oxalate transmembrane transporter activity GO:0019532 P oxalate transport GO:0030507 F spectrin binding GO:0034220 P ion transmembrane transport GO:0034766 P negative regulation of ion transmembrane transport GO:0035864 P response to potassium ion GO:0042391 P regulation of membrane potential GO:0042493 P response to xenobiotic stimulus GO:0042803 F protein homodimerization activity GO:0045793 P positive regulation of cell size GO:0051262 P protein tetramerization GO:0051453 P regulation of intracellular pH GO:0055085 P transmembrane transport GO:0090102 P cochlea development GO:0097066 P response to thyroid hormone GO:0098656 P anion transmembrane transport GO:1902074 P response to salt GO:1902358 P sulfate transmembrane transport GO:1902476 P chloride transmembrane transport GO:2000147 P positive regulation of cell motility
2759	O_BomaASG12484_complete:A_BomaASG_c29738_g3_i1 112bp
2760	O_BomaASG12485_complete:A_BomaASG_c29738_g3_i1 107bp