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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2281 O_BomaASG12053_complete:A_BomaASG_c29478_g1_i2
123bp
2282 O_BomaASG12054_5prime_partial:A_BomaASG_c29478_g1_i3
602bp
uncharacterized_protein_LOC101744460_isoform_X1_[Bombyx_mori]
2283 O_BomaASG12055_complete:A_BomaASG_c29478_g1_i3
123bp
2284 O_BomaASG12056_3prime_partial:A_BomaASG_c29479_g1_i1
118bp
ommochrome-binding_protein_[Bombyx_mori]
2285 O_BomaASG12057_internal:A_BomaASG_c29479_g1_i2
142bp
ommochrome-binding_protein_[Bombyx_mori]
2286 O_BomaASG12058_complete:A_BomaASG_c29480_g1_i1
1303bp
MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
2287 O_BomaASG12059_complete:A_BomaASG_c29480_g1_i1
148bp
2288 O_BomaASG1205_internal:A_BomaASG_c8585_g1_i1
233bp
sodium-independent_sulfate_anion_transporter_isoform_X5_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
2289 O_BomaASG12060_complete:A_BomaASG_c29480_g1_i1
145bp
2290 O_BomaASG12061_complete:A_BomaASG_c29480_g1_i1
144bp
2291 O_BomaASG12062_complete:A_BomaASG_c29480_g1_i1
107bp
2292 O_BomaASG12063_complete:A_BomaASG_c29480_g1_i1
106bp
2293 O_BomaASG12064_complete:A_BomaASG_c29480_g1_i1
100bp
2294 O_BomaASG12065_complete:A_BomaASG_c29482_g1_i1
471bp
heterogeneous_nuclear_ribonucleoprotein_L_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0010467 P gene expression
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0035770 C ribonucleoprotein granule
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045120 C pronucleus
GO:0070062 C extracellular exosome
GO:0097157 F pre-mRNA intronic binding
2295 O_BomaASG12066_5prime_partial:A_BomaASG_c29482_g1_i1
106bp
2296 O_BomaASG12067_5prime_partial:A_BomaASG_c29483_g1_i1
299bp
uncharacterized_protein_LOC101741756_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
2297 O_BomaASG12068_complete:A_BomaASG_c29483_g1_i2
271bp
uncharacterized_protein_LOC101741756_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
2298 O_BomaASG12069_5prime_partial:A_BomaASG_c29484_g1_i1
131bp
mitochondrial_ornithine_transporter_1_isoform_X2_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2299 O_BomaASG1206_3prime_partial:A_BomaASG_c8585_g1_i1
148bp
2300 O_BomaASG12070_complete:A_BomaASG_c29484_g1_i1
122bp
mitochondrial_ornithine_transporter_1_isoform_X2_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0000066 P mitochondrial L-ornithine transmembrane transport
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006520 P cellular amino acid metabolic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903352 P L-ornithine transmembrane transport
2301 O_BomaASG12071_5prime_partial:A_BomaASG_c29484_g1_i2
200bp
mitochondrial_ornithine_transporter_1_isoform_X2_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0000066 P mitochondrial L-ornithine transmembrane transport
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006520 P cellular amino acid metabolic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903352 P L-ornithine transmembrane transport
2302 O_BomaASG12072_5prime_partial:A_BomaASG_c29485_g1_i1
178bp
LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
2303 O_BomaASG12073_5prime_partial:A_BomaASG_c29485_g1_i1
163bp
2304 O_BomaASG12074_internal:A_BomaASG_c29488_g1_i1
195bp
uncharacterized_protein_LOC101737956_[Bombyx_mori]
2305 O_BomaASG12075_complete:A_BomaASG_c29489_g1_i1
136bp
uncharacterized_protein_LOC105841395_isoform_X1_[Bombyx_mori]
2306 O_BomaASG12076_5prime_partial:A_BomaASG_c29490_g1_i1
101bp
2307 O_BomaASG12077_5prime_partial:A_BomaASG_c29491_g1_i1
323bp
major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2308 O_BomaASG12078_5prime_partial:A_BomaASG_c29491_g1_i2
290bp
major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2309 O_BomaASG12079_5prime_partial:A_BomaASG_c29491_g1_i5
133bp
major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
2310 O_BomaASG1207_5prime_partial:A_BomaASG_c8585_g1_i1
102bp
hypothetical_protein_WH47_02013_[Habropoda_laboriosa]
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