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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1411 O_BomaASG11270_5prime_partial:A_BomaASG_c28972_g2_i3
162bp
1412 O_BomaASG11271_5prime_partial:A_BomaASG_c28972_g2_i3
100bp
1413 O_BomaASG11272_internal:A_BomaASG_c28973_g1_i1
107bp
1414 O_BomaASG11273_internal:A_BomaASG_c28973_g1_i1
106bp
anaphase-promoting_complex_subunit_1_[Bombyx_mori]
1415 O_BomaASG11274_internal:A_BomaASG_c28973_g1_i1
106bp
1416 O_BomaASG11275_internal:A_BomaASG_c28973_g1_i2
160bp
anaphase-promoting_complex_subunit_1_[Bombyx_mori]
1417 O_BomaASG11276_internal:A_BomaASG_c28973_g1_i2
160bp
1418 O_BomaASG11277_5prime_partial:A_BomaASG_c28973_g1_i2
135bp
1419 O_BomaASG11278_5prime_partial:A_BomaASG_c28973_g1_i2
135bp
1420 O_BomaASG11279_3prime_partial:A_BomaASG_c28974_g1_i3
216bp
tetraspanin-5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0045747 P positive regulation of Notch signaling pathway
GO:0051604 P protein maturation
GO:0090002 P protein localization to plasma membrane
1421 O_BomaASG1127_internal:A_BomaASG_c7774_g1_i1
119bp
axin_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
1422 O_BomaASG11280_5prime_partial:A_BomaASG_c28974_g1_i3
113bp
1423 O_BomaASG11281_internal:A_BomaASG_c28975_g1_i1
107bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744024_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006810 P transport
GO:0007165 P signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
1424 O_BomaASG11282_5prime_partial:A_BomaASG_c28975_g1_i1
105bp
1425 O_BomaASG11283_5prime_partial:A_BomaASG_c28975_g2_i1
481bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744024_[Bombyx_mori]
GO:0005576 C extracellular region
1426 O_BomaASG11284_complete:A_BomaASG_c28975_g2_i1
124bp
1427 O_BomaASG11285_5prime_partial:A_BomaASG_c28976_g1_i2
138bp
probable_palmitoyltransferase_ZDHHC16_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
1428 O_BomaASG11286_5prime_partial:A_BomaASG_c28976_g1_i3
263bp
probable_palmitoyltransferase_ZDHHC16_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
1429 O_BomaASG11287_complete:A_BomaASG_c28976_g1_i3
111bp
1430 O_BomaASG11288_internal:A_BomaASG_c28978_g1_i1
329bp
spidroin-1_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0004872 F signaling receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0044822 F RNA binding
1431 O_BomaASG11289_5prime_partial:A_BomaASG_c28978_g1_i1
300bp
hypothetical_protein_KP79_PYT05567_[Mizuhopecten_yessoensis]
1432 O_BomaASG1128_5prime_partial:A_BomaASG_c7818_g1_i1
175bp
protein_patched_[Bombyx_mori]
1433 O_BomaASG11290_internal:A_BomaASG_c28978_g1_i2
201bp
spidroin-1_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0004872 F signaling receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0044822 F RNA binding
1434 O_BomaASG11291_5prime_partial:A_BomaASG_c28978_g1_i2
171bp
1435 O_BomaASG11292_complete:A_BomaASG_c28981_g1_i1
388bp
heterogeneous_nuclear_ribonucleoprotein_K_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
1436 O_BomaASG11293_complete:A_BomaASG_c28981_g1_i1
162bp
1437 O_BomaASG11294_complete:A_BomaASG_c28981_g1_i1
135bp
1438 O_BomaASG11295_complete:A_BomaASG_c28981_g1_i1
103bp
1439 O_BomaASG11296_complete:A_BomaASG_c28981_g1_i2
305bp
heterogeneous_nuclear_ribonucleoprotein_K_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
1440 O_BomaASG11297_complete:A_BomaASG_c28981_g1_i2
162bp
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