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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1381 O_BomaASG11243_complete:A_BomaASG_c28963_g1_i2
157bp
1382 O_BomaASG11244_3prime_partial:A_BomaASG_c28963_g1_i3
415bp
folliculin_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0001932 P regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0010508 P positive regulation of autophagy
GO:0010629 P negative regulation of gene expression
GO:0010823 P negative regulation of mitochondrion organization
GO:0016525 P negative regulation of angiogenesis
GO:0030097 P hemopoiesis
GO:0030308 P negative regulation of cell growth
GO:0030336 P negative regulation of cell migration
GO:0030496 C midbody
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031929 P TOR signaling
GO:0032006 P regulation of TOR signaling
GO:0032007 P negative regulation of TOR signaling
GO:0032008 P positive regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0032465 P regulation of cytokinesis
GO:0035024 P negative regulation of Rho protein signal transduction
GO:0035065 P regulation of histone acetylation
GO:0043547 P positive regulation of GTPase activity
GO:0044291 C cell-cell contact zone
GO:0045785 P positive regulation of cell adhesion
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051898 P negative regulation of protein kinase B signaling
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:1900181 P negative regulation of protein localization to nucleus
GO:1901723 P negative regulation of cell proliferation involved in kidney development
GO:1901856 P negative regulation of cellular respiration
GO:1901859 P negative regulation of mitochondrial DNA metabolic process
GO:1901862 P negative regulation of muscle tissue development
GO:1901874 P negative regulation of post-translational protein modification
GO:2000506 P energy homeostasis
GO:2000973 P regulation of pro-B cell differentiation
GO:2001170 P negative regulation of ATP biosynthetic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1383 O_BomaASG11245_complete:A_BomaASG_c28963_g1_i3
157bp
1384 O_BomaASG11246_complete:A_BomaASG_c28964_g3_i1
510bp
proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
1385 O_BomaASG11247_complete:A_BomaASG_c28964_g3_i2
510bp
proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
1386 O_BomaASG11248_5prime_partial:A_BomaASG_c28965_g1_i1
221bp
1387 O_BomaASG11249_3prime_partial:A_BomaASG_c28965_g1_i1
190bp
1388 O_BomaASG1124_internal:A_BomaASG_c7734_g1_i1
108bp
ribosomal_protein_S17_[Danaus_plexippus_plexippus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1389 O_BomaASG11250_5prime_partial:A_BomaASG_c28965_g1_i1
169bp
E3_ubiquitin-protein_ligase_RFWD2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1390 O_BomaASG11251_5prime_partial:A_BomaASG_c28965_g1_i2
443bp
1391 O_BomaASG11252_3prime_partial:A_BomaASG_c28965_g1_i2
411bp
1392 O_BomaASG11253_5prime_partial:A_BomaASG_c28965_g1_i2
390bp
E3_ubiquitin-protein_ligase_RFWD2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1393 O_BomaASG11254_5prime_partial:A_BomaASG_c28965_g1_i2
265bp
1394 O_BomaASG11255_5prime_partial:A_BomaASG_c28967_g1_i1
257bp
LOW_QUALITY_PROTEIN:_bifunctional_lysine-specific_demethylase_and_histidyl-hydroxylase_NO66_[Bombyx_mori]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
1395 O_BomaASG11256_5prime_partial:A_BomaASG_c28967_g1_i2
214bp
LOW_QUALITY_PROTEIN:_bifunctional_lysine-specific_demethylase_and_histidyl-hydroxylase_NO66_[Bombyx_mori]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
1396 O_BomaASG11257_complete:A_BomaASG_c28969_g1_i1
367bp
3-hydroxyisobutyryl-CoA_hydrolase,_mitochondrial_[Bombyx_mori]
GO:0003860 F 3-hydroxyisobutyryl-CoA hydrolase activity
GO:0005739 C mitochondrion
GO:0006574 P valine catabolic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016787 F hydrolase activity
GO:0016836 F hydro-lyase activity
1397 O_BomaASG11258_complete:A_BomaASG_c28969_g1_i2
384bp
3-hydroxyisobutyryl-CoA_hydrolase,_mitochondrial_[Bombyx_mori]
GO:0003860 F 3-hydroxyisobutyryl-CoA hydrolase activity
GO:0005739 C mitochondrion
GO:0006574 P valine catabolic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016787 F hydrolase activity
GO:0016836 F hydro-lyase activity
1398 O_BomaASG11259_complete:A_BomaASG_c28969_g1_i3
367bp
3-hydroxyisobutyryl-CoA_hydrolase,_mitochondrial_[Bombyx_mori]
GO:0003860 F 3-hydroxyisobutyryl-CoA hydrolase activity
GO:0005739 C mitochondrion
GO:0006574 P valine catabolic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016787 F hydrolase activity
GO:0016836 F hydro-lyase activity
1399 O_BomaASG1125_5prime_partial:A_BomaASG_c7750_g1_i1
126bp
supervillin_isoform_X4_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
1400 O_BomaASG11260_internal:A_BomaASG_c28972_g1_i1
99bp
1401 O_BomaASG11261_internal:A_BomaASG_c28972_g1_i1
99bp
1402 O_BomaASG11262_internal:A_BomaASG_c28972_g1_i1
99bp
zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
1403 O_BomaASG11263_internal:A_BomaASG_c28972_g2_i1
284bp
zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1404 O_BomaASG11264_5prime_partial:A_BomaASG_c28972_g2_i1
187bp
1405 O_BomaASG11265_5prime_partial:A_BomaASG_c28972_g2_i1
100bp
1406 O_BomaASG11266_internal:A_BomaASG_c28972_g2_i2
350bp
zinc_finger_SWIM_domain-containing_protein_8_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1407 O_BomaASG11267_5prime_partial:A_BomaASG_c28972_g2_i2
253bp
1408 O_BomaASG11268_5prime_partial:A_BomaASG_c28972_g2_i2
100bp
1409 O_BomaASG11269_internal:A_BomaASG_c28972_g2_i3
259bp
zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1410 O_BomaASG1126_internal:A_BomaASG_c7771_g1_i1
151bp
PREDICTED:_uncharacterized_protein_LOC106708353,_partial_[Papilio_machaon]
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