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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9781 O_BomoMSG18804_3prime_partial:A_BomoMSG_c26238_g1_i6
168bp
 organic_cation_transporter_protein-like_isoform_X3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005277 F acetylcholine transmembrane transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005333 F norepinephrine:sodium symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006836 P neurotransmitter transport
GO:0008513 F secondary active organic cation transmembrane transporter activity
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015872 P dopamine transport
GO:0015874 P norepinephrine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:1901374 P acetate ester transport
9782 O_BomoMSG18805_complete:A_BomoMSG_c26238_g1_i7
405bp
 organic_cation_transporter_protein-like_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015697 P quaternary ammonium group transport
GO:0015879 P carnitine transport
GO:0015893 P xenobiotic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0030165 F PDZ domain binding
GO:0031526 C brush border membrane
GO:0052106 P obsolete quorum sensing involved in interaction with host
GO:0055085 P transmembrane transport
GO:0060731 P positive regulation of intestinal epithelial structure maintenance
GO:0070062 C extracellular exosome
GO:0070715 P sodium-dependent organic cation transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
9783 O_BomoMSG18806_3prime_partial:A_BomoMSG_c26238_g1_i7
291bp
 uncharacterized_protein_LOC110386453,_partial_[Bombyx_mori]
9784 O_BomoMSG18807_complete:A_BomoMSG_c26238_g1_i7
100bp
9785 O_BomoMSG18808_5prime_partial:A_BomoMSG_c26238_g4_i2
184bp
9786 O_BomoMSG18809_3prime_partial:A_BomoMSG_c26238_g4_i2
179bp
 uncharacterized_protein_LOC105841508_[Bombyx_mori]
9787 O_BomoMSG1880_5prime_partial:A_BomoMSG_c9212_g1_i1
177bp
 transcription_initiation_factor_IIB_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
9788 O_BomoMSG18810_internal:A_BomoMSG_c26239_g1_i1
410bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
9789 O_BomoMSG18811_5prime_partial:A_BomoMSG_c26239_g1_i2
325bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
9790 O_BomoMSG18812_5prime_partial:A_BomoMSG_c26239_g1_i3
330bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
9791 O_BomoMSG18813_3prime_partial:A_BomoMSG_c26239_g1_i5
475bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
9792 O_BomoMSG18814_complete:A_BomoMSG_c26240_g1_i1
301bp
 ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
9793 O_BomoMSG18815_complete:A_BomoMSG_c26240_g1_i1
184bp
9794 O_BomoMSG18816_5prime_partial:A_BomoMSG_c26240_g1_i2
151bp
9795 O_BomoMSG18817_complete:A_BomoMSG_c26241_g1_i2
335bp
 probable_tRNA_N6-adenosine_threonylcarbamoyltransferase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
9796 O_BomoMSG18818_complete:A_BomoMSG_c26242_g1_i1
376bp
 proline-rich_protein_PRCC_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
9797 O_BomoMSG18819_complete:A_BomoMSG_c26242_g1_i1
125bp
9798 O_BomoMSG1881_internal:A_BomoMSG_c9213_g1_i1
112bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
9799 O_BomoMSG18820_complete:A_BomoMSG_c26242_g1_i2
107bp
9800 O_BomoMSG18821_complete:A_BomoMSG_c26242_g1_i4
151bp
 proline-rich_protein_PRCC_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
9801 O_BomoMSG18822_3prime_partial:A_BomoMSG_c26243_g1_i1
518bp
 facilitated_trehalose_transporter_Tret1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
9802 O_BomoMSG18823_complete:A_BomoMSG_c26243_g1_i3
353bp
 facilitated_trehalose_transporter_Tret1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
9803 O_BomoMSG18824_internal:A_BomoMSG_c26246_g1_i1
308bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
9804 O_BomoMSG18825_3prime_partial:A_BomoMSG_c26246_g1_i2
721bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
9805 O_BomoMSG18826_internal:A_BomoMSG_c26246_g1_i3
333bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
9806 O_BomoMSG18827_3prime_partial:A_BomoMSG_c26247_g1_i1
158bp
 tRNA_(guanine-N(7)-)-methyltransferase_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008176 F tRNA (guanine-N7-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
9807 O_BomoMSG18828_3prime_partial:A_BomoMSG_c26247_g1_i2
224bp
 tRNA_(guanine-N(7)-)-methyltransferase_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008176 F tRNA (guanine-N7-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
9808 O_BomoMSG18829_internal:A_BomoMSG_c26248_g1_i1
285bp
 DENN_domain-containing_protein_5B_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005262 F calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
GO:0050982 P detection of mechanical stimulus
GO:0070588 P calcium ion transmembrane transport
9809 O_BomoMSG1882_internal:A_BomoMSG_c9222_g1_i1
101bp
 uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
9810 O_BomoMSG18830_3prime_partial:A_BomoMSG_c26248_g1_i2
633bp
 DENN_domain-containing_protein_5B_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005262 F calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
GO:0050982 P detection of mechanical stimulus
GO:0070588 P calcium ion transmembrane transport
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