Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
961	O_BomoMSG10866_complete:A_BomoMSG_c22964_g2_i1 100bp	Bomo_Chr16	uncharacterized_protein_LOC109862627,_partial_[Pseudomyrmex_gracilis]
962	O_BomoMSG10867_internal:A_BomoMSG_c22966_g2_i1 144bp	Bomo_Chr15	beta-1,3-galactosyltransferase_6_isoform_X1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0005797 C Golgi medial cisterna GO:0006024 P glycosaminoglycan biosynthetic process GO:0006486 P protein glycosylation GO:0008378 F galactosyltransferase activity GO:0008499 F UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity GO:0015012 P heparan sulfate proteoglycan biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0035250 F UDP-galactosyltransferase activity GO:0047220 F galactosylxylosylprotein 3-beta-galactosyltransferase activity
963	O_BomoMSG10868_internal:A_BomoMSG_c22966_g2_i2 208bp	Bomo_Chr15	beta-1,3-galactosyltransferase_6_isoform_X2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0005797 C Golgi medial cisterna GO:0006024 P glycosaminoglycan biosynthetic process GO:0006486 P protein glycosylation GO:0008378 F galactosyltransferase activity GO:0008499 F UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity GO:0015012 P heparan sulfate proteoglycan biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0035250 F UDP-galactosyltransferase activity GO:0047220 F galactosylxylosylprotein 3-beta-galactosyltransferase activity
964	O_BomoMSG10869_3prime_partial:A_BomoMSG_c22967_g1_i1 136bp	Bomo_Chr10	E3_ubiquitin-protein_ligase_SIAH1-like_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005769 C early endosome GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0006511 P ubiquitin-dependent protein catabolic process GO:0006915 P apoptotic process GO:0007049 P cell cycle GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0008022 F protein C-terminus binding GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030154 P cell differentiation GO:0030163 P protein catabolic process GO:0030877 C beta-catenin destruction complex GO:0031648 P protein destabilization GO:0042787 P ubiquitin-dependent protein catabolic process GO:0042802 F identical protein binding GO:0043065 P positive regulation of apoptotic process GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process GO:0046872 F metal ion binding GO:0051402 P neuron apoptotic process GO:0061630 F ubiquitin protein ligase activity GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
965	O_BomoMSG1086_internal:A_BomoMSG_c5106_g1_i1 193bp	Bomo_Chr17	uncharacterized_protein_LOC110385512,_partial_[Bombyx_mori]
966	O_BomoMSG10870_internal:A_BomoMSG_c22968_g1_i1 345bp	Bomo_Chr9	probable_ubiquitin_carboxyl-terminal_hydrolase_creB_[Bombyx_mori]	GO:0001662 P behavioral fear response GO:0004843 F thiol-dependent deubiquitinase GO:0006508 P proteolysis GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007610 P behavior GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008343 P adult feeding behavior GO:0016579 P protein deubiquitination GO:0016787 F hydrolase activity GO:0032228 P regulation of synaptic transmission, GABAergic GO:0036459 F thiol-dependent deubiquitinase GO:0048149 P behavioral response to ethanol GO:0060013 P righting reflex
967	O_BomoMSG10871_complete:A_BomoMSG_c22968_g1_i1 111bp	Bomo_Chr9
968	O_BomoMSG10872_internal:A_BomoMSG_c22971_g1_i1 333bp	Bomo_Chr2	uncharacterized_protein_LOC101745407_isoform_X3_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0046872 F metal ion binding
969	O_BomoMSG10873_5prime_partial:A_BomoMSG_c22971_g1_i1 145bp	Bomo_Chr2
970	O_BomoMSG10874_3prime_partial:A_BomoMSG_c22971_g1_i1 105bp	Bomo_Chr2
971	O_BomoMSG10875_internal:A_BomoMSG_c22971_g1_i2 309bp	Bomo_Chr2	uncharacterized_protein_LOC101745407_isoform_X2_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0046872 F metal ion binding
972	O_BomoMSG10876_5prime_partial:A_BomoMSG_c22971_g1_i2 145bp	Bomo_Chr2
973	O_BomoMSG10877_3prime_partial:A_BomoMSG_c22973_g1_i1 116bp	Bomo_Chr24
974	O_BomoMSG10878_5prime_partial:A_BomoMSG_c22973_g1_i1 102bp	Bomo_Chr24	LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
975	O_BomoMSG10879_5prime_partial:A_BomoMSG_c22973_g1_i2 225bp	Bomo_Chr24	LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
976	O_BomoMSG1087_5prime_partial:A_BomoMSG_c5108_g1_i1 119bp	Bomo_Chr11	uncharacterized_protein_LOC105842376_[Bombyx_mori]
977	O_BomoMSG10880_complete:A_BomoMSG_c22973_g1_i2 118bp	Bomo_Chr24
978	O_BomoMSG10881_5prime_partial:A_BomoMSG_c22973_g1_i2 111bp	Bomo_Chr24
979	O_BomoMSG10882_5prime_partial:A_BomoMSG_c22973_g1_i3 124bp	Bomo_Chr24	LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
980	O_BomoMSG10883_complete:A_BomoMSG_c22973_g1_i3 118bp	Bomo_Chr24
981	O_BomoMSG10884_internal:A_BomoMSG_c22978_g1_i1 146bp	Bomo_Chr12	uncharacterized_protein_LOC105842810_isoform_X1_[Bombyx_mori]
982	O_BomoMSG10885_internal:A_BomoMSG_c22978_g2_i1 352bp	Bomo_Chr12	probable_methyltransferase_TARBP1_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006357 P regulation of transcription by RNA polymerase II GO:0006396 P RNA processing GO:0008168 F methyltransferase activity GO:0008173 F RNA methyltransferase activity GO:0016423 F tRNA (guanine) methyltransferase activity GO:0016740 F transferase activity GO:0030488 P tRNA methylation GO:0032259 P methylation
983	O_BomoMSG10886_3prime_partial:A_BomoMSG_c22978_g2_i2 444bp	Bomo_Chr12	probable_methyltransferase_TARBP1_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006357 P regulation of transcription by RNA polymerase II GO:0006396 P RNA processing GO:0008168 F methyltransferase activity GO:0008173 F RNA methyltransferase activity GO:0016423 F tRNA (guanine) methyltransferase activity GO:0016740 F transferase activity GO:0030488 P tRNA methylation GO:0032259 P methylation
984	O_BomoMSG10887_internal:A_BomoMSG_c22979_g1_i1 195bp	Bomo_Chr25	Mo-molybdopterin_cofactor_sulfurase_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005739 C mitochondrion GO:0005741 C mitochondrial outer membrane GO:0005777 C peroxisome GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0030151 F molybdenum ion binding GO:0030170 F pyridoxal phosphate binding GO:0055114 P obsolete oxidation-reduction process
985	O_BomoMSG10888_3prime_partial:A_BomoMSG_c22980_g1_i1 305bp	Bomo_Chr2	UBX_domain-containing_protein_4_[Bombyx_mori]	GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006986 P response to unfolded protein GO:0016020 C membrane GO:0030433 P ubiquitin-dependent ERAD pathway
986	O_BomoMSG10889_5prime_partial:A_BomoMSG_c22980_g1_i1 165bp	Bomo_Chr2
987	O_BomoMSG1088_internal:A_BomoMSG_c5111_g1_i1 157bp	Bomo_Chr18	SLIT-ROBO_Rho_GTPase-activating_protein_3-like,_partial_[Bombyx_mori]	GO:0005096 F GTPase activator activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0007165 P signal transduction GO:0007399 P nervous system development GO:0014069 C postsynaptic density GO:0016020 C membrane GO:0030027 C lamellipodium GO:0030054 C cell junction GO:0030336 P negative regulation of cell migration GO:0031410 C cytoplasmic vesicle GO:0042803 F protein homodimerization activity GO:0042995 C cell projection GO:0043197 C dendritic spine GO:0043547 P positive regulation of GTPase activity GO:0044327 C dendritic spine head GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0045335 C phagocytic vesicle GO:0046847 P filopodium assembly GO:0048365 F small GTPase binding GO:0048812 P neuron projection morphogenesis GO:0051014 P actin filament severing GO:0060996 P dendritic spine development GO:2001223 P negative regulation of neuron migration
988	O_BomoMSG10890_complete:A_BomoMSG_c22980_g1_i2 130bp	Bomo_Chr2	UBX_domain-containing_protein_4_[Bombyx_mori]	GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006986 P response to unfolded protein GO:0016020 C membrane GO:0030433 P ubiquitin-dependent ERAD pathway
989	O_BomoMSG10891_internal:A_BomoMSG_c22981_g1_i1 264bp	Bomo_Chr4	mitochondrial_uncoupling_protein_Bmcp_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006810 P transport GO:0006839 P mitochondrial transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031966 C mitochondrial membrane
990	O_BomoMSG10892_5prime_partial:A_BomoMSG_c22981_g1_i1 109bp	Bomo_Chr4