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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9481 O_BomoMSG18534_internal:A_BomoMSG_c26159_g1_i2
202bp
 zinc_finger_protein_260_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9482 O_BomoMSG18535_internal:A_BomoMSG_c26159_g1_i3
259bp
 zinc_finger_protein_260_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9483 O_BomoMSG18536_internal:A_BomoMSG_c26159_g1_i3
259bp
9484 O_BomoMSG18537_internal:A_BomoMSG_c26159_g1_i4
522bp
 zinc_finger_protein_260_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9485 O_BomoMSG18538_5prime_partial:A_BomoMSG_c26159_g1_i4
388bp
9486 O_BomoMSG18539_internal:A_BomoMSG_c26159_g1_i5
132bp
 zinc_finger_protein_260_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9487 O_BomoMSG1853_internal:A_BomoMSG_c9031_g1_i1
255bp
 hypothetical_protein_RR48_13816_[Papilio_machaon]
9488 O_BomoMSG18540_internal:A_BomoMSG_c26159_g1_i5
132bp
9489 O_BomoMSG18541_complete:A_BomoMSG_c26160_g1_i1
461bp
 glucose_transporter_type_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090277 P positive regulation of peptide hormone secretion
GO:1904659 P glucose transmembrane transport
9490 O_BomoMSG18542_complete:A_BomoMSG_c26160_g1_i1
102bp
9491 O_BomoMSG18543_complete:A_BomoMSG_c26160_g1_i3
461bp
 glucose_transporter_type_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090277 P positive regulation of peptide hormone secretion
GO:1904659 P glucose transmembrane transport
9492 O_BomoMSG18544_complete:A_BomoMSG_c26160_g1_i3
102bp
9493 O_BomoMSG18545_complete:A_BomoMSG_c26161_g1_i1
580bp
 tyrosine-protein_kinase_CSK_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001817 P regulation of cytokine production
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0019903 F protein phosphatase binding
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032715 P negative regulation of interleukin-6 production
GO:0033673 P negative regulation of kinase activity
GO:0034236 F protein kinase A catalytic subunit binding
GO:0034332 P adherens junction organization
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042802 F identical protein binding
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0043406 P positive regulation of MAP kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045779 P negative regulation of bone resorption
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048709 P oligodendrocyte differentiation
GO:0050765 P negative regulation of phagocytosis
GO:0050863 P regulation of T cell activation
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071375 P cellular response to peptide hormone stimulus
9494 O_BomoMSG18546_3prime_partial:A_BomoMSG_c26161_g1_i1
173bp
9495 O_BomoMSG18547_internal:A_BomoMSG_c26161_g1_i2
140bp
9496 O_BomoMSG18548_5prime_partial:A_BomoMSG_c26161_g1_i2
107bp
 tyrosine-protein_kinase_CSK_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001817 P regulation of cytokine production
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0019903 F protein phosphatase binding
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032715 P negative regulation of interleukin-6 production
GO:0033673 P negative regulation of kinase activity
GO:0034236 F protein kinase A catalytic subunit binding
GO:0034332 P adherens junction organization
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042802 F identical protein binding
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0043406 P positive regulation of MAP kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045779 P negative regulation of bone resorption
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048709 P oligodendrocyte differentiation
GO:0050765 P negative regulation of phagocytosis
GO:0050863 P regulation of T cell activation
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071375 P cellular response to peptide hormone stimulus
9497 O_BomoMSG18549_5prime_partial:A_BomoMSG_c26164_g1_i2
305bp
 LOW_QUALITY_PROTEIN:_striatin-interacting_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0022604 P regulation of cell morphogenesis
GO:0030866 P cortical actin cytoskeleton organization
9498 O_BomoMSG1854_internal:A_BomoMSG_c9042_g1_i1
107bp
9499 O_BomoMSG18550_5prime_partial:A_BomoMSG_c26164_g1_i3
687bp
 LOW_QUALITY_PROTEIN:_striatin-interacting_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0022604 P regulation of cell morphogenesis
GO:0030866 P cortical actin cytoskeleton organization
GO:0070062 C extracellular exosome
9500 O_BomoMSG18551_3prime_partial:A_BomoMSG_c26165_g1_i1
102bp
 islet_cell_autoantigen_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043496 P regulation of protein homodimerization activity
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050796 P regulation of insulin secretion
9501 O_BomoMSG18552_5prime_partial:A_BomoMSG_c26165_g2_i2
175bp
 islet_cell_autoantigen_1_[Bombyx_mori]
9502 O_BomoMSG18553_5prime_partial:A_BomoMSG_c26165_g2_i3
245bp
 islet_cell_autoantigen_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043496 P regulation of protein homodimerization activity
GO:0045202 C synapse
GO:0046928 P regulation of neurotransmitter secretion
GO:0048471 C perinuclear region of cytoplasm
GO:0050796 P regulation of insulin secretion
9503 O_BomoMSG18554_complete:A_BomoMSG_c26167_g1_i1
161bp
 syntaxin_6_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0031201 C SNARE complex
GO:0032588 C trans-Golgi network membrane
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043195 C terminal bouton
GO:0045335 C phagocytic vesicle
GO:0048193 P Golgi vesicle transport
GO:0048278 P vesicle docking
GO:0048471 C perinuclear region of cytoplasm
GO:0090161 P Golgi ribbon formation
GO:1903827 P regulation of protein localization
9504 O_BomoMSG18555_5prime_partial:A_BomoMSG_c26167_g1_i2
172bp
 syntaxin_6_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005484 F SNAP receptor activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0048193 P Golgi vesicle transport
GO:0061025 P membrane fusion
9505 O_BomoMSG18556_internal:A_BomoMSG_c26168_g1_i1
940bp
 atrophin-1-like_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001105 F transcription coactivator activity
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016605 C PML body
GO:0021549 P cerebellum development
GO:0021691 P cerebellar Purkinje cell layer maturation
GO:0021930 P cerebellar granule cell precursor proliferation
GO:0021942 P radial glia guided migration of Purkinje cell
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048755 P branching morphogenesis of a nerve
GO:0048813 P dendrite morphogenesis
9506 O_BomoMSG18557_complete:A_BomoMSG_c26169_g1_i1
135bp
 sialic_acid_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008781 F N-acylneuraminate cytidylyltransferase activity
GO:0009103 P lipopolysaccharide biosynthetic process
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0047444 F N-acylneuraminate-9-phosphate synthase activity
GO:0050462 F N-acetylneuraminate synthase activity
GO:0070062 C extracellular exosome
9507 O_BomoMSG18558_complete:A_BomoMSG_c26169_g1_i4
123bp
 sialic_acid_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008781 F N-acylneuraminate cytidylyltransferase activity
GO:0009103 P lipopolysaccharide biosynthetic process
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0047444 F N-acylneuraminate-9-phosphate synthase activity
GO:0050462 F N-acetylneuraminate synthase activity
GO:0070062 C extracellular exosome
9508 O_BomoMSG18559_5prime_partial:A_BomoMSG_c26169_g1_i5
143bp
9509 O_BomoMSG1855_internal:A_BomoMSG_c9047_g1_i1
212bp
 glycerophosphodiester_phosphodiesterase_1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
GO:0047395 F glycerophosphoinositol glycerophosphodiesterase activity
9510 O_BomoMSG18560_3prime_partial:A_BomoMSG_c26169_g1_i6
113bp
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