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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9451 O_BomoMSG18507_5prime_partial:A_BomoMSG_c26151_g1_i1
103bp
9452 O_BomoMSG18508_internal:A_BomoMSG_c26151_g1_i2
321bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9453 O_BomoMSG18509_3prime_partial:A_BomoMSG_c26151_g1_i3
415bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9454 O_BomoMSG1850_internal:A_BomoMSG_c9010_g2_i1
130bp
 ephrin_type-A_receptor_3,_partial_[Bombyx_mori]
9455 O_BomoMSG18510_3prime_partial:A_BomoMSG_c26151_g1_i4
415bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9456 O_BomoMSG18511_internal:A_BomoMSG_c26151_g1_i5
423bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9457 O_BomoMSG18512_5prime_partial:A_BomoMSG_c26154_g1_i1
509bp
 putative_homeodomain_transcription_factor_1,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
9458 O_BomoMSG18513_complete:A_BomoMSG_c26154_g1_i1
133bp
9459 O_BomoMSG18514_complete:A_BomoMSG_c26154_g1_i1
124bp
9460 O_BomoMSG18515_5prime_partial:A_BomoMSG_c26154_g1_i2
390bp
 putative_homeodomain_transcription_factor_1,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
9461 O_BomoMSG18516_complete:A_BomoMSG_c26154_g1_i2
133bp
9462 O_BomoMSG18517_complete:A_BomoMSG_c26154_g1_i3
867bp
 putative_homeodomain_transcription_factor_1,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
9463 O_BomoMSG18518_complete:A_BomoMSG_c26154_g1_i3
133bp
9464 O_BomoMSG18519_complete:A_BomoMSG_c26154_g1_i3
124bp
9465 O_BomoMSG1851_internal:A_BomoMSG_c9022_g1_i1
109bp
 zinc_finger_protein_845_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9466 O_BomoMSG18520_internal:A_BomoMSG_c26156_g1_i1
250bp
 PREDICTED:_CLIP-associating_protein-like,_partial_[Papilio_machaon]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
9467 O_BomoMSG18521_internal:A_BomoMSG_c26156_g1_i1
249bp
9468 O_BomoMSG18522_complete:A_BomoMSG_c26156_g1_i1
137bp
9469 O_BomoMSG18523_3prime_partial:A_BomoMSG_c26156_g1_i2
303bp
 PREDICTED:_CLIP-associating_protein-like,_partial_[Papilio_machaon]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
9470 O_BomoMSG18524_5prime_partial:A_BomoMSG_c26156_g1_i2
278bp
9471 O_BomoMSG18525_complete:A_BomoMSG_c26156_g1_i2
137bp
9472 O_BomoMSG18526_3prime_partial:A_BomoMSG_c26156_g1_i3
303bp
 PREDICTED:_CLIP-associating_protein-like,_partial_[Papilio_machaon]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
9473 O_BomoMSG18527_5prime_partial:A_BomoMSG_c26156_g1_i3
278bp
9474 O_BomoMSG18528_complete:A_BomoMSG_c26156_g1_i3
137bp
9475 O_BomoMSG18529_3prime_partial:A_BomoMSG_c26157_g1_i1
242bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
9476 O_BomoMSG1852_internal:A_BomoMSG_c9022_g1_i2
101bp
 zinc_finger_protein_845_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9477 O_BomoMSG18530_3prime_partial:A_BomoMSG_c26157_g1_i2
562bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
9478 O_BomoMSG18531_complete:A_BomoMSG_c26157_g1_i2
104bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
9479 O_BomoMSG18532_complete:A_BomoMSG_c26158_g1_i3
137bp
 uncharacterized_protein_LOC100101190_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
9480 O_BomoMSG18533_internal:A_BomoMSG_c26159_g1_i2
202bp
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