Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9301	O_BomoMSG18372_complete:A_BomoMSG_c26118_g1_i2 533bp	Bomo_Chr24	U4/U6_small_nuclear_ribonucleoprotein_Prp4_[Bombyx_mori]	GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0071001 C U4/U6 snRNP GO:0097525 C spliceosomal snRNP complex
9302	O_BomoMSG18373_complete:A_BomoMSG_c26118_g1_i2 222bp	Bomo_Chr24
9303	O_BomoMSG18374_complete:A_BomoMSG_c26118_g1_i2 115bp	Bomo_Chr24
9304	O_BomoMSG18375_5prime_partial:A_BomoMSG_c26118_g1_i3 487bp	Bomo_Chr24	U4/U6_small_nuclear_ribonucleoprotein_Prp4_[Bombyx_mori]	GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0071001 C U4/U6 snRNP GO:0097525 C spliceosomal snRNP complex
9305	O_BomoMSG18376_complete:A_BomoMSG_c26118_g1_i3 222bp	Bomo_Chr24
9306	O_BomoMSG18377_complete:A_BomoMSG_c26118_g1_i3 115bp	Bomo_Chr24
9307	O_BomoMSG18378_complete:A_BomoMSG_c26119_g1_i1 254bp	Bomo_Chr4	uncharacterized_protein_C18orf19_homolog_A_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0016020 C membrane GO:0016021 C integral component of membrane
9308	O_BomoMSG18379_complete:A_BomoMSG_c26121_g1_i1 452bp	Bomo_Chr27	ATP-binding_cassette_sub-family_D_member_2_[Bombyx_mori]	GO:0000038 P very long-chain fatty acid metabolic process GO:0000166 F nucleotide binding GO:0005324 F long-chain fatty acid transporter activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005777 C peroxisome GO:0005778 C peroxisomal membrane GO:0005829 C cytosol GO:0006635 P fatty acid beta-oxidation GO:0006810 P transport GO:0015909 P long-chain fatty acid transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0032000 P positive regulation of fatty acid beta-oxidation GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0042760 P very long-chain fatty acid catabolic process GO:0042803 F protein homodimerization activity GO:0043231 C intracellular membrane-bounded organelle GO:0055085 P transmembrane transport
9309	O_BomoMSG1837_internal:A_BomoMSG_c8926_g1_i1 140bp	Bomo_Chr6	uncharacterized_protein_LOC101739113_[Bombyx_mori]
9310	O_BomoMSG18380_3prime_partial:A_BomoMSG_c26121_g1_i1 209bp	Bomo_Chr27	ATP-binding_cassette_sub-family_D_member_2_[Bombyx_mori]	GO:0000038 P very long-chain fatty acid metabolic process GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005777 C peroxisome GO:0005778 C peroxisomal membrane GO:0006635 P fatty acid beta-oxidation GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0032000 P positive regulation of fatty acid beta-oxidation GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0042760 P very long-chain fatty acid catabolic process GO:0042803 F protein homodimerization activity GO:0043231 C intracellular membrane-bounded organelle GO:0055085 P transmembrane transport
9311	O_BomoMSG18381_complete:A_BomoMSG_c26121_g1_i1 193bp	Bomo_Chr27
9312	O_BomoMSG18382_complete:A_BomoMSG_c26121_g1_i1 149bp	Bomo_Chr27
9313	O_BomoMSG18383_complete:A_BomoMSG_c26122_g1_i1 490bp	Bomo_Chr26	large_neutral_amino_acids_transporter_small_subunit_1_isoform_X2_[Bombyx_mori]	GO:0003333 P amino acid transmembrane transport GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006865 P amino acid transport GO:0015171 F amino acid transmembrane transporter activity GO:0015179 F L-amino acid transmembrane transporter activity GO:0015297 F antiporter activity GO:0015807 P L-amino acid transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:1902475 P L-alpha-amino acid transmembrane transport
9314	O_BomoMSG18384_5prime_partial:A_BomoMSG_c26122_g1_i2 427bp	Bomo_Chr26	Y+L_amino_acid_transporter_2_isoform_X1_[Bombyx_mori]	GO:0003333 P amino acid transmembrane transport GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006865 P amino acid transport GO:0015171 F amino acid transmembrane transporter activity GO:0015179 F L-amino acid transmembrane transporter activity GO:0015297 F antiporter activity GO:0015807 P L-amino acid transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:1902475 P L-alpha-amino acid transmembrane transport
9315	O_BomoMSG18385_3prime_partial:A_BomoMSG_c26123_g1_i1 116bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]
9316	O_BomoMSG18386_5prime_partial:A_BomoMSG_c26123_g1_i1 109bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
9317	O_BomoMSG18387_3prime_partial:A_BomoMSG_c26123_g1_i2 293bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000002 P mitochondrial genome maintenance GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005657 C replication fork GO:0005739 C mitochondrion GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0010521 F telomerase inhibitor activity GO:0016787 F hydrolase activity GO:0032211 P negative regulation of telomere maintenance via telomerase GO:0032508 P DNA duplex unwinding GO:0043141 F 5'-3' DNA helicase activity GO:0044806 P G-quadruplex DNA unwinding GO:0051276 P chromosome organization GO:0051974 P negative regulation of telomerase activity
9318	O_BomoMSG18388_complete:A_BomoMSG_c26123_g1_i2 134bp	Bomo_Chr24	conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]
9319	O_BomoMSG18389_5prime_partial:A_BomoMSG_c26123_g1_i2 109bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
9320	O_BomoMSG1838_complete:A_BomoMSG_c8932_g1_i1 498bp	Bomo_Chr4	large_neutral_amino_acids_transporter_small_subunit_1_[Bombyx_mori]	GO:0003333 P amino acid transmembrane transport GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006520 P cellular amino acid metabolic process GO:0006810 P transport GO:0006865 P amino acid transport GO:0007275 P multicellular organism development GO:0007399 P nervous system development GO:0015171 F amino acid transmembrane transporter activity GO:0015175 F neutral amino acid transmembrane transporter activity GO:0015179 F L-amino acid transmembrane transporter activity GO:0015297 F antiporter activity GO:0015804 P neutral amino acid transport GO:0015807 P L-amino acid transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016324 C apical plasma membrane GO:0030154 P cell differentiation GO:0042605 F peptide antigen binding GO:0043231 C intracellular membrane-bounded organelle GO:0050900 P leukocyte migration GO:0070062 C extracellular exosome GO:1902475 P L-alpha-amino acid transmembrane transport
9321	O_BomoMSG18390_3prime_partial:A_BomoMSG_c26123_g1_i3 299bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000002 P mitochondrial genome maintenance GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005657 C replication fork GO:0005739 C mitochondrion GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0010521 F telomerase inhibitor activity GO:0016787 F hydrolase activity GO:0032211 P negative regulation of telomere maintenance via telomerase GO:0032508 P DNA duplex unwinding GO:0043141 F 5'-3' DNA helicase activity GO:0044806 P G-quadruplex DNA unwinding GO:0051276 P chromosome organization GO:0051974 P negative regulation of telomerase activity
9322	O_BomoMSG18391_complete:A_BomoMSG_c26123_g1_i3 134bp	Bomo_Chr24	conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]
9323	O_BomoMSG18392_5prime_partial:A_BomoMSG_c26123_g1_i3 109bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
9324	O_BomoMSG18393_complete:A_BomoMSG_c26123_g1_i4 316bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000002 P mitochondrial genome maintenance GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005657 C replication fork GO:0005739 C mitochondrion GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0010521 F telomerase inhibitor activity GO:0016787 F hydrolase activity GO:0032211 P negative regulation of telomere maintenance via telomerase GO:0032508 P DNA duplex unwinding GO:0043141 F 5'-3' DNA helicase activity GO:0044806 P G-quadruplex DNA unwinding GO:0051276 P chromosome organization GO:0051974 P negative regulation of telomerase activity
9325	O_BomoMSG18394_complete:A_BomoMSG_c26123_g1_i4 134bp	Bomo_Chr24	conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]
9326	O_BomoMSG18395_5prime_partial:A_BomoMSG_c26123_g1_i4 109bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
9327	O_BomoMSG18396_3prime_partial:A_BomoMSG_c26123_g1_i5 267bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000002 P mitochondrial genome maintenance GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005657 C replication fork GO:0005739 C mitochondrion GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0010521 F telomerase inhibitor activity GO:0016787 F hydrolase activity GO:0032211 P negative regulation of telomere maintenance via telomerase GO:0032508 P DNA duplex unwinding GO:0043141 F 5'-3' DNA helicase activity GO:0044806 P G-quadruplex DNA unwinding GO:0051276 P chromosome organization GO:0051974 P negative regulation of telomerase activity
9328	O_BomoMSG18397_complete:A_BomoMSG_c26123_g1_i5 134bp	Bomo_Chr24	conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]
9329	O_BomoMSG18398_5prime_partial:A_BomoMSG_c26123_g1_i5 109bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000723 P telomere maintenance GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding
9330	O_BomoMSG18399_3prime_partial:A_BomoMSG_c26123_g1_i6 141bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]