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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9061 O_BomoMSG18156_complete:A_BomoMSG_c26055_g1_i2
130bp
9062 O_BomoMSG18157_complete:A_BomoMSG_c26055_g1_i2
125bp
9063 O_BomoMSG18158_5prime_partial:A_BomoMSG_c26055_g1_i2
100bp
9064 O_BomoMSG18159_internal:A_BomoMSG_c26057_g1_i1
127bp
 AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
9065 O_BomoMSG1815_3prime_partial:A_BomoMSG_c8855_g1_i1
113bp
9066 O_BomoMSG18160_internal:A_BomoMSG_c26057_g1_i2
445bp
 AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
9067 O_BomoMSG18161_3prime_partial:A_BomoMSG_c26057_g1_i3
482bp
 AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
9068 O_BomoMSG18162_3prime_partial:A_BomoMSG_c26057_g1_i4
482bp
 AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
9069 O_BomoMSG18163_5prime_partial:A_BomoMSG_c26058_g1_i1
272bp
 sugar_transporter_ERD6-like_4_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
9070 O_BomoMSG18164_5prime_partial:A_BomoMSG_c26058_g1_i2
245bp
 sugar_transporter_ERD6-like_4_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
9071 O_BomoMSG18165_3prime_partial:A_BomoMSG_c26060_g1_i1
581bp
 myotubularin-related_protein_10-A_[Bombyx_mori]
9072 O_BomoMSG18166_5prime_partial:A_BomoMSG_c26062_g1_i1
447bp
 uncharacterized_protein_LOC101746332_[Bombyx_mori]
9073 O_BomoMSG18167_internal:A_BomoMSG_c26063_g1_i1
264bp
 probable_methylcrotonoyl-CoA_carboxylase_beta_chain,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0007563 P regulation of eclosion
GO:0016421 F CoA carboxylase activity
GO:0016874 F ligase activity
9074 O_BomoMSG18168_internal:A_BomoMSG_c26063_g1_i2
537bp
 probable_methylcrotonoyl-CoA_carboxylase_beta_chain,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0007563 P regulation of eclosion
GO:0016421 F CoA carboxylase activity
GO:0016874 F ligase activity
9075 O_BomoMSG18169_3prime_partial:A_BomoMSG_c26063_g1_i3
543bp
 probable_methylcrotonoyl-CoA_carboxylase_beta_chain,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0007563 P regulation of eclosion
GO:0016421 F CoA carboxylase activity
GO:0016874 F ligase activity
9076 O_BomoMSG1816_complete:A_BomoMSG_c8856_g1_i1
150bp
 uncharacterized_protein_LOC101743136_[Bombyx_mori]
9077 O_BomoMSG18170_internal:A_BomoMSG_c26063_g1_i4
238bp
 probable_methylcrotonoyl-CoA_carboxylase_beta_chain,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0007563 P regulation of eclosion
GO:0016421 F CoA carboxylase activity
GO:0016874 F ligase activity
9078 O_BomoMSG18171_complete:A_BomoMSG_c26065_g2_i5
501bp
 LOW_QUALITY_PROTEIN:_fumarate_hydratase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
9079 O_BomoMSG18172_complete:A_BomoMSG_c26065_g2_i5
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
9080 O_BomoMSG18173_complete:A_BomoMSG_c26065_g2_i6
479bp
 LOW_QUALITY_PROTEIN:_fumarate_hydratase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004333 F fumarate hydratase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006099 P tricarboxylic acid cycle
GO:0006106 P fumarate metabolic process
GO:0006108 P malate metabolic process
GO:0016829 F lyase activity
GO:0045239 C tricarboxylic acid cycle enzyme complex
GO:0051262 P protein tetramerization
9081 O_BomoMSG18174_complete:A_BomoMSG_c26065_g2_i6
193bp
 Uncharacterised_protein_[Bordetella_pertussis]
9082 O_BomoMSG18175_complete:A_BomoMSG_c26066_g1_i1
293bp
 collagen_type_IV_alpha-3-binding_protein_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008289 F lipid binding
GO:0035620 F ceramide transfer activity
GO:0035621 P ER to Golgi ceramide transport
GO:0097001 F ceramide binding
9083 O_BomoMSG18176_complete:A_BomoMSG_c26066_g1_i1
128bp
9084 O_BomoMSG18177_complete:A_BomoMSG_c26066_g1_i1
109bp
9085 O_BomoMSG18178_complete:A_BomoMSG_c26066_g1_i1
104bp
9086 O_BomoMSG18179_complete:A_BomoMSG_c26066_g1_i2
553bp
 collagen_type_IV_alpha-3-binding_protein_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0035621 P ER to Golgi ceramide transport
GO:0070273 F phosphatidylinositol-4-phosphate binding
9087 O_BomoMSG1817_complete:A_BomoMSG_c8859_g1_i1
291bp
 zinc_transporter_ZIP9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006829 P zinc ion transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
GO:0055085 P transmembrane transport
9088 O_BomoMSG18180_complete:A_BomoMSG_c26066_g1_i2
134bp
9089 O_BomoMSG18181_complete:A_BomoMSG_c26066_g1_i2
119bp
9090 O_BomoMSG18182_complete:A_BomoMSG_c26066_g1_i2
109bp
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