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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8731 O_BomoMSG1785_internal:A_BomoMSG_c8672_g1_i1
150bp
 uncharacterized_protein_LOC110377082_[Helicoverpa_armigera]
8732 O_BomoMSG17860_5prime_partial:A_BomoMSG_c25966_g1_i1
146bp
8733 O_BomoMSG17861_complete:A_BomoMSG_c25966_g1_i1
102bp
8734 O_BomoMSG17862_5prime_partial:A_BomoMSG_c25968_g2_i1
233bp
 homeobox_protein_homothorax-like_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
8735 O_BomoMSG17863_complete:A_BomoMSG_c25968_g2_i1
160bp
8736 O_BomoMSG17864_complete:A_BomoMSG_c25968_g2_i1
122bp
8737 O_BomoMSG17865_complete:A_BomoMSG_c25968_g2_i1
105bp
8738 O_BomoMSG17866_5prime_partial:A_BomoMSG_c25968_g2_i2
115bp
 homeobox_protein_homothorax_isoform_X4_[Helicoverpa_armigera]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
8739 O_BomoMSG17867_complete:A_BomoMSG_c25968_g3_i1
107bp
8740 O_BomoMSG17868_complete:A_BomoMSG_c25968_g3_i2
234bp
 homeobox_protein_homothorax-like_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
8741 O_BomoMSG17869_complete:A_BomoMSG_c25968_g3_i2
107bp
8742 O_BomoMSG1786_5prime_partial:A_BomoMSG_c8672_g1_i1
132bp
8743 O_BomoMSG17870_complete:A_BomoMSG_c25969_g1_i1
411bp
 serine_protease_inhibitor_4_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0070062 C extracellular exosome
8744 O_BomoMSG17871_complete:A_BomoMSG_c25969_g1_i1
110bp
8745 O_BomoMSG17872_3prime_partial:A_BomoMSG_c25970_g1_i1
431bp
 TIMELESS-interacting_protein_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0044770 P cell cycle phase transition
GO:0048478 P replication fork protection
GO:0051301 P cell division
8746 O_BomoMSG17873_3prime_partial:A_BomoMSG_c25970_g1_i2
232bp
 TIMELESS-interacting_protein_[Bombyx_mori]
8747 O_BomoMSG17874_complete:A_BomoMSG_c25971_g1_i1
533bp
 fatty_acyl-CoA_reductase_wat_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
8748 O_BomoMSG17875_5prime_partial:A_BomoMSG_c25971_g1_i2
372bp
 fatty_acyl-CoA_reductase_wat_isoform_X2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
8749 O_BomoMSG17876_3prime_partial:A_BomoMSG_c25972_g1_i1
1093bp
 small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
8750 O_BomoMSG17877_internal:A_BomoMSG_c25972_g1_i2
975bp
 small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
8751 O_BomoMSG17878_internal:A_BomoMSG_c25972_g1_i3
348bp
 small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
8752 O_BomoMSG17879_complete:A_BomoMSG_c25973_g1_i1
350bp
 glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
8753 O_BomoMSG1787_internal:A_BomoMSG_c8687_g1_i1
175bp
 uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
8754 O_BomoMSG17880_complete:A_BomoMSG_c25973_g1_i1
162bp
8755 O_BomoMSG17881_complete:A_BomoMSG_c25973_g1_i1
115bp
8756 O_BomoMSG17882_5prime_partial:A_BomoMSG_c25973_g1_i2
202bp
 glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
8757 O_BomoMSG17883_complete:A_BomoMSG_c25973_g1_i2
162bp
8758 O_BomoMSG17884_5prime_partial:A_BomoMSG_c25974_g1_i1
455bp
 uncharacterized_protein_LOC101735476_isoform_X1_[Bombyx_mori]
GO:0000932 C P-body
GO:0005515 F protein binding
GO:0005737 C cytoplasm
8759 O_BomoMSG17885_complete:A_BomoMSG_c25974_g1_i1
126bp
8760 O_BomoMSG17886_internal:A_BomoMSG_c25975_g1_i1
570bp
 pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP16_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
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