Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7621	O_BomoMSG16860_complete:A_BomoMSG_c25639_g1_i1 252bp	Bomo_Chr4	sorting_nexin-20_[Bombyx_mori]	GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding GO:0005768 C endosome GO:0006810 P transport GO:0008150 P biological_process GO:0008289 F lipid binding GO:0015031 P protein transport GO:0016020 C membrane GO:0030659 C cytoplasmic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0031901 C early endosome membrane GO:0032266 F phosphatidylinositol-3-phosphate binding GO:0035091 F phosphatidylinositol binding
7622	O_BomoMSG16861_complete:A_BomoMSG_c25639_g1_i1 100bp	Bomo_Chr4
7623	O_BomoMSG16862_5prime_partial:A_BomoMSG_c25639_g1_i2 180bp	Bomo_Chr4	sorting_nexin-20_[Bombyx_mori]	GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding GO:0005768 C endosome GO:0006810 P transport GO:0008289 F lipid binding GO:0015031 P protein transport GO:0016020 C membrane GO:0030659 C cytoplasmic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0031901 C early endosome membrane GO:0032266 F phosphatidylinositol-3-phosphate binding GO:0035091 F phosphatidylinositol binding
7624	O_BomoMSG16863_5prime_partial:A_BomoMSG_c25640_g2_i1 228bp	Bomo_Chr14	Envelope_fusion_protein_[Papilio_xuthus]
7625	O_BomoMSG16864_5prime_partial:A_BomoMSG_c25640_g2_i2 264bp	Bomo_Chr14	Envelope_fusion_protein_[Papilio_xuthus]
7626	O_BomoMSG16865_internal:A_BomoMSG_c25642_g1_i2 165bp	Bomo_Chr10	receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004383 F guanylate cyclase activity GO:0004672 F protein kinase activity GO:0005524 F ATP binding GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0006182 P cGMP biosynthetic process GO:0006468 P protein phosphorylation GO:0009190 P cyclic nucleotide biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016829 F lyase activity GO:0016849 F phosphorus-oxygen lyase activity GO:0035556 P intracellular signal transduction
7627	O_BomoMSG16866_internal:A_BomoMSG_c25642_g1_i3 291bp	Bomo_Chr10	receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004016 F adenylate cyclase activity GO:0004383 F guanylate cyclase activity GO:0004672 F protein kinase activity GO:0004872 F signaling receptor activity GO:0005524 F ATP binding GO:0005525 F GTP binding GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006182 P cGMP biosynthetic process GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0008074 C guanylate cyclase complex, soluble GO:0009190 P cyclic nucleotide biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016829 F lyase activity GO:0016849 F phosphorus-oxygen lyase activity GO:0019934 P cGMP-mediated signaling GO:0035556 P intracellular signal transduction
7628	O_BomoMSG16867_internal:A_BomoMSG_c25642_g1_i4 154bp	Bomo_Chr10	receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004016 F adenylate cyclase activity GO:0004383 F guanylate cyclase activity GO:0004672 F protein kinase activity GO:0005524 F ATP binding GO:0005525 F GTP binding GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006182 P cGMP biosynthetic process GO:0006468 P protein phosphorylation GO:0007166 P cell surface receptor signaling pathway GO:0007168 P receptor guanylyl cyclase signaling pathway GO:0007186 P G protein-coupled receptor signaling pathway GO:0007589 P body fluid secretion GO:0008074 C guanylate cyclase complex, soluble GO:0008217 P regulation of blood pressure GO:0008528 F G protein-coupled peptide receptor activity GO:0009190 P cyclic nucleotide biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016525 P negative regulation of angiogenesis GO:0016829 F lyase activity GO:0016849 F phosphorus-oxygen lyase activity GO:0016941 F natriuretic peptide receptor activity GO:0017046 F peptide hormone binding GO:0019901 F protein kinase binding GO:0030308 P negative regulation of cell growth GO:0030828 P obsolete positive regulation of cGMP biosynthetic process GO:0035556 P intracellular signal transduction GO:0035810 P positive regulation of urine volume GO:0035815 P positive regulation of renal sodium excretion GO:0042312 P blood vessel diameter maintenance GO:0042417 P dopamine metabolic process GO:0042562 F hormone binding GO:0043114 P regulation of vascular permeability GO:0043235 C receptor complex GO:0048662 P negative regulation of smooth muscle cell proliferation GO:0050880 P blood vessel diameter maintenance GO:1903779 P regulation of cardiac conduction
7629	O_BomoMSG16868_complete:A_BomoMSG_c25643_g2_i1 105bp	Bomo_Chr23
7630	O_BomoMSG16869_3prime_partial:A_BomoMSG_c25645_g1_i1 125bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC105392209_[Plutella_xylostella]
7631	O_BomoMSG1686_3prime_partial:A_BomoMSG_c7995_g1_i1 112bp	Bomo_Chr10
7632	O_BomoMSG16870_3prime_partial:A_BomoMSG_c25645_g1_i2 125bp	Bomo_Chr9	PREDICTED:_uncharacterized_protein_LOC105392209_[Plutella_xylostella]
7633	O_BomoMSG16871_3prime_partial:A_BomoMSG_c25645_g1_i3 125bp	Bomo_Chr6	PREDICTED:_uncharacterized_protein_LOC105392209_[Plutella_xylostella]
7634	O_BomoMSG16872_5prime_partial:A_BomoMSG_c25645_g1_i4 169bp	Bomo_Chr10	PREDICTED:_uncharacterized_protein_LOC106717627_[Papilio_machaon]
7635	O_BomoMSG16873_3prime_partial:A_BomoMSG_c25645_g1_i4 125bp	Bomo_Chr10	PREDICTED:_uncharacterized_protein_LOC105392209_[Plutella_xylostella]
7636	O_BomoMSG16874_5prime_partial:A_BomoMSG_c25646_g2_i1 207bp	Bomo_Chr25	transmembrane_protein_179_[Bombyx_mori]	GO:0003674 F molecular_function GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
7637	O_BomoMSG16875_5prime_partial:A_BomoMSG_c25646_g2_i2 217bp	Bomo_Chr25	transmembrane_protein_179_[Bombyx_mori]	GO:0003674 F molecular_function GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
7638	O_BomoMSG16876_complete:A_BomoMSG_c25647_g1_i1 304bp	Bomo_Chr6	eIF2B-alpha_protein_[Bombyx_mori]	GO:0003743 F translation initiation factor activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005737 C cytoplasm GO:0005851 C eukaryotic translation initiation factor 2B complex GO:0005886 C plasma membrane GO:0006412 P translation GO:0006413 P translational initiation GO:0006446 P regulation of translational initiation GO:0014003 P oligodendrocyte development GO:0016020 C membrane GO:0019509 P L-methionine salvage from methylthioadenosine GO:0043547 P positive regulation of GTPase activity GO:0044237 P cellular metabolic process GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity GO:0051716 P cellular response to stimulus
7639	O_BomoMSG16877_complete:A_BomoMSG_c25649_g1_i3 105bp	Bomo_Chr9	migration_and_invasion_enhancer_1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0006915 P apoptotic process GO:0016020 C membrane GO:0030335 P positive regulation of cell migration GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane GO:0043066 P negative regulation of apoptotic process GO:0051491 P positive regulation of filopodium assembly GO:0070062 C extracellular exosome
7640	O_BomoMSG16878_complete:A_BomoMSG_c25651_g1_i2 192bp	Bomo_Chr5	dual_specificity_protein_phosphatase_13_isoform_X4_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004725 F protein tyrosine phosphatase activity GO:0005737 C cytoplasm GO:0006470 P protein dephosphorylation GO:0008138 F protein tyrosine/serine/threonine phosphatase activity GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0035335 P peptidyl-tyrosine dephosphorylation
7641	O_BomoMSG16879_complete:A_BomoMSG_c25651_g1_i4 131bp	Bomo_Chr5	dual_specificity_protein_phosphatase_13_isoform_X4_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004725 F protein tyrosine phosphatase activity GO:0005737 C cytoplasm GO:0006470 P protein dephosphorylation GO:0008138 F protein tyrosine/serine/threonine phosphatase activity GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0035335 P peptidyl-tyrosine dephosphorylation
7642	O_BomoMSG1687_internal:A_BomoMSG_c8001_g1_i1 170bp	Bomo_Chr22	uncharacterized_protein_LOC110384324_[Helicoverpa_armigera]
7643	O_BomoMSG16880_internal:A_BomoMSG_c25652_g1_i1 503bp	Bomo_Chr7	transcription_initiation_factor_TFIID_subunit_3_[Bombyx_mori]
7644	O_BomoMSG16881_internal:A_BomoMSG_c25652_g1_i2 527bp	Bomo_Chr7	transcription_initiation_factor_TFIID_subunit_3_[Bombyx_mori]
7645	O_BomoMSG16882_3prime_partial:A_BomoMSG_c25652_g1_i3 1022bp	Bomo_Chr7	transcription_initiation_factor_TFIID_subunit_3_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0002039 F p53 binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005669 C transcription factor TFIID complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0008270 F zinc ion binding GO:0043433 P negative regulation of DNA-binding transcription factor activity GO:0046872 F metal ion binding GO:0051457 P maintenance of protein location in nucleus
7646	O_BomoMSG16883_internal:A_BomoMSG_c25654_g1_i1 110bp	Bomo_Chr15	zinc_finger_protein_665_isoform_X2_[Bombyx_mori]	GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7647	O_BomoMSG16884_5prime_partial:A_BomoMSG_c25654_g2_i1 145bp	Bomo_Chr15	zinc_finger_protein_665_isoform_X2_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7648	O_BomoMSG16885_5prime_partial:A_BomoMSG_c25654_g2_i2 171bp	Bomo_Chr15	zinc_finger_protein_665_isoform_X2_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7649	O_BomoMSG16886_complete:A_BomoMSG_c25655_g1_i1 503bp	Bomo_Chr24	heterogeneous_nuclear_ribonucleoprotein_L_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0006397 P mRNA processing GO:0010467 P gene expression GO:0016020 C membrane GO:0030529 C ribonucleoprotein complex GO:0035770 C ribonucleoprotein granule GO:0044212 F transcription cis-regulatory region binding GO:0044822 F RNA binding GO:0045120 C pronucleus GO:0070062 C extracellular exosome GO:0097157 F pre-mRNA intronic binding
7650	O_BomoMSG16887_5prime_partial:A_BomoMSG_c25655_g1_i1 106bp	Bomo_Chr24