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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7561 O_BomoMSG16806_complete:A_BomoMSG_c25623_g2_i1
125bp
7562 O_BomoMSG16807_complete:A_BomoMSG_c25623_g2_i2
266bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
7563 O_BomoMSG16808_complete:A_BomoMSG_c25623_g2_i2
152bp
7564 O_BomoMSG16809_complete:A_BomoMSG_c25623_g2_i2
125bp
7565 O_BomoMSG1680_internal:A_BomoMSG_c7975_g1_i1
103bp
 hypothetical_protein_2_-_silkworm_transposon_mag
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
7566 O_BomoMSG16810_3prime_partial:A_BomoMSG_c25625_g1_i1
231bp
 uncharacterized_protein_LOC101738263_isoform_X2_[Bombyx_mori]
7567 O_BomoMSG16811_5prime_partial:A_BomoMSG_c25625_g2_i1
166bp
 uncharacterized_protein_LOC101738263_isoform_X1_[Bombyx_mori]
7568 O_BomoMSG16812_3prime_partial:A_BomoMSG_c25626_g1_i2
303bp
 methyltransferase-like_protein_2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
7569 O_BomoMSG16813_5prime_partial:A_BomoMSG_c25627_g1_i1
319bp
 general_transcription_factor_IIH_subunit_1_isoform_X1_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
7570 O_BomoMSG16814_complete:A_BomoMSG_c25627_g1_i1
101bp
7571 O_BomoMSG16815_5prime_partial:A_BomoMSG_c25627_g1_i2
462bp
 general_transcription_factor_IIH_subunit_1_isoform_X1_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
7572 O_BomoMSG16816_complete:A_BomoMSG_c25627_g1_i2
101bp
7573 O_BomoMSG16817_complete:A_BomoMSG_c25627_g1_i3
575bp
 general_transcription_factor_IIH_subunit_1_isoform_X1_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
7574 O_BomoMSG16818_complete:A_BomoMSG_c25627_g1_i3
101bp
7575 O_BomoMSG16819_complete:A_BomoMSG_c25628_g2_i1
151bp
 PREDICTED:_uncharacterized_protein_LOC106720787_[Papilio_machaon]
7576 O_BomoMSG1681_internal:A_BomoMSG_c7976_g1_i1
122bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
7577 O_BomoMSG16820_complete:A_BomoMSG_c25629_g1_i1
119bp
7578 O_BomoMSG16821_5prime_partial:A_BomoMSG_c25630_g1_i1
166bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106142549_[Amyelois_transitella]
7579 O_BomoMSG16822_5prime_partial:A_BomoMSG_c25630_g1_i2
112bp
 uncharacterized_protein_LOC101740899_[Bombyx_mori]
7580 O_BomoMSG16823_internal:A_BomoMSG_c25630_g2_i1
105bp
 uncharacterized_protein_LOC101740899_[Bombyx_mori]
7581 O_BomoMSG16824_complete:A_BomoMSG_c25631_g1_i1
681bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
7582 O_BomoMSG16825_complete:A_BomoMSG_c25631_g1_i1
127bp
7583 O_BomoMSG16826_5prime_partial:A_BomoMSG_c25631_g1_i2
953bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
7584 O_BomoMSG16827_complete:A_BomoMSG_c25631_g1_i2
127bp
7585 O_BomoMSG16828_5prime_partial:A_BomoMSG_c25632_g1_i1
115bp
 embryonic_polarity_protein_dorsal_isoform_A_[Bombyx_mori]
7586 O_BomoMSG16829_5prime_partial:A_BomoMSG_c25633_g1_i1
477bp
 uncharacterized_protein_LOC101737350_[Bombyx_mori]
7587 O_BomoMSG1682_3prime_partial:A_BomoMSG_c7980_g1_i1
114bp
 dual_specificity_tyrosine-phosphorylation-regulated_kinase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
7588 O_BomoMSG16830_5prime_partial:A_BomoMSG_c25633_g1_i2
483bp
 uncharacterized_protein_LOC101737350_[Bombyx_mori]
7589 O_BomoMSG16831_internal:A_BomoMSG_c25633_g1_i3
483bp
 uncharacterized_protein_LOC101737350_[Bombyx_mori]
7590 O_BomoMSG16832_5prime_partial:A_BomoMSG_c25634_g1_i1
154bp
 pyruvate_dehydrogenase_[acetyl-transferring]-phosphatase_1,_mitochondrial_isoform_X4_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004741 F [pyruvate dehydrogenase (lipoamide)] phosphatase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0043169 F cation binding
GO:0046872 F metal ion binding
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