Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7351	O_BomoMSG16617_3prime_partial:A_BomoMSG_c25565_g1_i2 672bp	Bomo_Chr22	protein_transport_protein_Sec24A_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport GO:0008270 F zinc ion binding GO:0015031 P protein transport GO:0016020 C membrane GO:0016192 P vesicle-mediated transport GO:0030127 C COPII vesicle coat GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process GO:0048471 C perinuclear region of cytoplasm GO:0050714 P positive regulation of protein secretion GO:2000189 P cholesterol homeostasis
7352	O_BomoMSG16618_5prime_partial:A_BomoMSG_c25565_g1_i2 175bp	Bomo_Chr22
7353	O_BomoMSG16619_internal:A_BomoMSG_c25565_g1_i3 181bp	Bomo_Chr22	protein_transport_protein_Sec24A_[Bombyx_mori]
7354	O_BomoMSG1661_internal:A_BomoMSG_c7925_g1_i1 385bp	Bomo_Chr19	angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]	GO:0001525 P angiogenesis GO:0001570 P vasculogenesis GO:0001938 P positive regulation of endothelial cell proliferation GO:0003676 F nucleic acid binding GO:0005515 F protein binding GO:0005576 C extracellular region GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007155 P cell adhesion GO:0007275 P multicellular organism development GO:0030154 P cell differentiation GO:0045766 P positive regulation of angiogenesis GO:0048471 C perinuclear region of cytoplasm
7355	O_BomoMSG16620_internal:A_BomoMSG_c25565_g1_i4 272bp	Bomo_Chr22	protein_transport_protein_Sec24A_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport GO:0008270 F zinc ion binding GO:0015031 P protein transport GO:0016020 C membrane GO:0016192 P vesicle-mediated transport GO:0030127 C COPII vesicle coat GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process GO:0048471 C perinuclear region of cytoplasm GO:0050714 P positive regulation of protein secretion GO:2000189 P cholesterol homeostasis
7356	O_BomoMSG16621_5prime_partial:A_BomoMSG_c25565_g1_i4 175bp	Bomo_Chr22
7357	O_BomoMSG16622_complete:A_BomoMSG_c25566_g1_i1 550bp	Bomo_Chr6	protein_TBRG4_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005739 C mitochondrion GO:0006468 P protein phosphorylation GO:0045333 P cellular respiration
7358	O_BomoMSG16623_complete:A_BomoMSG_c25566_g1_i3 550bp	Bomo_Chr6	protein_TBRG4_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005739 C mitochondrion GO:0006468 P protein phosphorylation GO:0045333 P cellular respiration
7359	O_BomoMSG16624_internal:A_BomoMSG_c25567_g1_i1 209bp	Bomo_Chr19	gastrula_zinc_finger_protein_XlCGF17.1_isoform_X1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7360	O_BomoMSG16625_3prime_partial:A_BomoMSG_c25567_g1_i3 274bp	Bomo_Chr19	gastrula_zinc_finger_protein_XlCGF17.1_isoform_X1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7361	O_BomoMSG16626_3prime_partial:A_BomoMSG_c25567_g1_i4 123bp	Bomo_Chr19	gastrula_zinc_finger_protein_XlCGF17.1_isoform_X1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7362	O_BomoMSG16627_5prime_partial:A_BomoMSG_c25568_g1_i1 248bp	Bomo_Chr10	multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]	GO:0001503 P ossification GO:0003993 F acid phosphatase activity GO:0004446 F inositol-hexakisphosphate phosphatase activity GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0006797 P polyphosphate metabolic process GO:0008969 F protein histidine phosphatase activity GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0030282 P bone mineralization GO:0030351 F inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase activity GO:0034417 F bisphosphoglycerate 3-phosphatase activity GO:0043647 P inositol phosphate metabolic process GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity GO:0052826 F inositol hexakisphosphate 2-phosphatase activity GO:0070062 C extracellular exosome
7363	O_BomoMSG16628_complete:A_BomoMSG_c25568_g1_i2 431bp	Bomo_Chr10	multiple_inositol_polyphosphate_phosphatase_1_isoform_X1_[Bombyx_mori]	GO:0003993 F acid phosphatase activity GO:0004446 F inositol-hexakisphosphate phosphatase activity GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0008152 P metabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0034417 F bisphosphoglycerate 3-phosphatase activity GO:0052826 F inositol hexakisphosphate 2-phosphatase activity
7364	O_BomoMSG16629_internal:A_BomoMSG_c25568_g1_i3 118bp	Bomo_Chr10	multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]
7365	O_BomoMSG1662_5prime_partial:A_BomoMSG_c7925_g1_i1 136bp	Bomo_Chr19
7366	O_BomoMSG16630_5prime_partial:A_BomoMSG_c25568_g1_i4 224bp	Bomo_Chr10	multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]	GO:0001503 P ossification GO:0003993 F acid phosphatase activity GO:0004446 F inositol-hexakisphosphate phosphatase activity GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0006797 P polyphosphate metabolic process GO:0008969 F protein histidine phosphatase activity GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0030282 P bone mineralization GO:0030351 F inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase activity GO:0034417 F bisphosphoglycerate 3-phosphatase activity GO:0043647 P inositol phosphate metabolic process GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity GO:0052826 F inositol hexakisphosphate 2-phosphatase activity GO:0070062 C extracellular exosome
7367	O_BomoMSG16631_3prime_partial:A_BomoMSG_c25569_g1_i1 342bp	Bomo_Chr5	zinc_finger_protein_239-like,_partial_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
7368	O_BomoMSG16632_5prime_partial:A_BomoMSG_c25570_g1_i2 286bp	Bomo_Chr28	uncharacterized_protein_LOC101736169_isoform_X2_[Bombyx_mori]
7369	O_BomoMSG16633_internal:A_BomoMSG_c25571_g1_i1 493bp	Bomo_Chr10	von_Willebrand_factor_C_and_EGF_domain-containing_protein_isoform_X1_[Bombyx_mori]	GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0030513 P positive regulation of BMP signaling pathway
7370	O_BomoMSG16634_complete:A_BomoMSG_c25571_g1_i1 125bp	Bomo_Chr10
7371	O_BomoMSG16635_5prime_partial:A_BomoMSG_c25571_g2_i2 268bp	Bomo_Chr10	mucin-5AC_[Helicoverpa_armigera]
7372	O_BomoMSG16636_complete:A_BomoMSG_c25572_g1_i1 241bp	Bomo_Chr12	pre-mRNA-splicing_factor_SPF27_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0000974 C Prp19 complex GO:0003674 F molecular_function GO:0005634 C nucleus GO:0005662 C DNA replication factor A complex GO:0005681 C spliceosomal complex GO:0005730 C nucleolus GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0030054 C cell junction GO:0071011 C precatalytic spliceosome GO:0071012 C catalytic step 1 spliceosome GO:0071013 C catalytic step 2 spliceosome
7373	O_BomoMSG16637_complete:A_BomoMSG_c25572_g1_i1 114bp	Bomo_Chr12
7374	O_BomoMSG16638_complete:A_BomoMSG_c25572_g2_i2 656bp	Bomo_Chr9	protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Bombyx_mori]	GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016477 P cell migration GO:0030027 C lamellipodium GO:0042995 C cell projection
7375	O_BomoMSG16639_complete:A_BomoMSG_c25572_g1_i2 241bp	Bomo_Chr12	pre-mRNA-splicing_factor_SPF27_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0000974 C Prp19 complex GO:0003674 F molecular_function GO:0005634 C nucleus GO:0005662 C DNA replication factor A complex GO:0005681 C spliceosomal complex GO:0005730 C nucleolus GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0030054 C cell junction GO:0071011 C precatalytic spliceosome GO:0071012 C catalytic step 1 spliceosome GO:0071013 C catalytic step 2 spliceosome
7376	O_BomoMSG1663_5prime_partial:A_BomoMSG_c7933_g1_i1 105bp	Bomo_Chr10
7377	O_BomoMSG16640_complete:A_BomoMSG_c25572_g1_i2 114bp	Bomo_Chr12
7378	O_BomoMSG16641_complete:A_BomoMSG_c25572_g2_i4 363bp	Bomo_Chr1	solute_carrier_family_35_member_F6_[Bombyx_mori]	GO:0005515 F protein binding GO:0005739 C mitochondrion GO:0005764 C lysosome GO:0005765 C lysosomal membrane GO:0006810 P transport GO:0008284 P positive regulation of cell population proliferation GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0070062 C extracellular exosome GO:1901029 P negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
7379	O_BomoMSG16642_complete:A_BomoMSG_c25572_g2_i4 113bp	Bomo_Chr1
7380	O_BomoMSG16643_complete:A_BomoMSG_c25572_g2_i5 656bp	Bomo_Chr15	protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Bombyx_mori]	GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016477 P cell migration GO:0030027 C lamellipodium GO:0042995 C cell projection