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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6781 O_BomoMSG16103_internal:A_BomoMSG_c25391_g1_i1
547bp
 NHL_repeat-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6782 O_BomoMSG16104_internal:A_BomoMSG_c25391_g1_i2
571bp
 NHL_repeat-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6783 O_BomoMSG16105_internal:A_BomoMSG_c25391_g1_i3
612bp
 NHL_repeat-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6784 O_BomoMSG16106_5prime_partial:A_BomoMSG_c25392_g1_i1
135bp
6785 O_BomoMSG16107_5prime_partial:A_BomoMSG_c25392_g1_i1
132bp
 protein_transport_protein_Sec24A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:2000189 P cholesterol homeostasis
6786 O_BomoMSG16108_internal:A_BomoMSG_c25393_g2_i1
281bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X4_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
6787 O_BomoMSG16109_internal:A_BomoMSG_c25393_g2_i2
193bp
 probable_phosphorylase_b_kinase_regulatory_subunit_beta_isoform_X5_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
6788 O_BomoMSG1610_complete:A_BomoMSG_c7809_g1_i1
106bp
 BCP_inhibitor_precursor_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
6789 O_BomoMSG16110_complete:A_BomoMSG_c25394_g2_i2
160bp
 acid_phosphatase_isoenzyme_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
6790 O_BomoMSG16111_complete:A_BomoMSG_c25394_g2_i3
160bp
 acid_phosphatase_isoenzyme_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
6791 O_BomoMSG16112_complete:A_BomoMSG_c25394_g2_i4
160bp
 acid_phosphatase_isoenzyme_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
6792 O_BomoMSG16113_internal:A_BomoMSG_c25395_g1_i1
302bp
 replication_factor_C_subunit_3_[Bombyx_mori]
GO:0000722 P telomere maintenance via recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0016887 F ATP hydrolysis activity
GO:0019985 P translesion synthesis
GO:0031390 C Ctf18 RFC-like complex
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0042276 P error-prone translesion synthesis
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0043142 F single-stranded DNA helicase activity
GO:0046683 P response to organophosphorus
GO:0070987 P error-free translesion synthesis
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
GO:1901796 P regulation of signal transduction by p53 class mediator
6793 O_BomoMSG16114_3prime_partial:A_BomoMSG_c25395_g1_i2
351bp
 replication_factor_C_subunit_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0016887 F ATP hydrolysis activity
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:0046683 P response to organophosphorus
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
6794 O_BomoMSG16115_3prime_partial:A_BomoMSG_c25396_g1_i1
127bp
 sericin_1-like_isoform_X3_[Bombyx_mori]
GO:0005576 C extracellular region
6795 O_BomoMSG16116_internal:A_BomoMSG_c25396_g1_i2
520bp
 sericin_1-like_isoform_X4_[Bombyx_mori]
GO:0005576 C extracellular region
6796 O_BomoMSG16117_3prime_partial:A_BomoMSG_c25396_g1_i2
100bp
6797 O_BomoMSG16118_complete:A_BomoMSG_c25396_g1_i2
100bp
6798 O_BomoMSG16119_internal:A_BomoMSG_c25396_g1_i3
226bp
 sericin_1-like_isoform_X7_[Bombyx_mori]
GO:0005576 C extracellular region
6799 O_BomoMSG1611_complete:A_BomoMSG_c7811_g1_i1
193bp
 ras-like_GTP-binding_protein_Rho1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001745 P compound eye morphogenesis
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007010 P cytoskeleton organization
GO:0007015 P actin filament organization
GO:0007164 P establishment of tissue polarity
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0007368 P determination of left/right symmetry
GO:0007369 P gastrulation
GO:0007370 P ventral furrow formation
GO:0007374 P posterior midgut invagination
GO:0007377 P germ-band extension
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007405 P neuroblast proliferation
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007601 P visual perception
GO:0008045 P motor neuron axon guidance
GO:0008347 P glial cell migration
GO:0008354 P germ cell migration
GO:0010004 P gastrulation involving germ band extension
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016203 P muscle attachment
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0019900 F kinase binding
GO:0030036 P actin cytoskeleton organization
GO:0030239 P myofibril assembly
GO:0030334 P regulation of cell migration
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030866 P cortical actin cytoskeleton organization
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0031532 P actin cytoskeleton reorganization
GO:0034613 P cellular protein localization
GO:0035006 P melanization defense response
GO:0035099 P hemocyte migration
GO:0035147 P branch fusion, open tracheal system
GO:0035149 P lumen formation, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035298 P regulation of Malpighian tubule size
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0042249 P establishment of planar polarity of embryonic epithelium
GO:0044291 C cell-cell contact zone
GO:0045179 C apical cortex
GO:0045184 P establishment of protein localization
GO:0045199 P maintenance of epithelial cell apical/basal polarity
GO:0046663 P dorsal closure, leading edge cell differentiation
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0050896 P response to stimulus
GO:0051017 P actin filament bundle assembly
GO:0051489 P regulation of filopodium assembly
GO:0051493 P regulation of cytoskeleton organization
GO:0070252 P actin-mediated cell contraction
GO:0070451 C cell hair
GO:0070593 P dendrite self-avoidance
GO:0071896 P protein localization to adherens junction
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090251 P protein localization involved in establishment of planar polarity
GO:0090254 P cell elongation involved in imaginal disc-derived wing morphogenesis
GO:0090303 P positive regulation of wound healing
GO:1901739 P regulation of myoblast fusion
GO:1903475 P mitotic actomyosin contractile ring assembly
GO:1904059 P regulation of locomotor rhythm
6800 O_BomoMSG16120_3prime_partial:A_BomoMSG_c25396_g1_i5
388bp
 sericin_1-like_isoform_X6_[Bombyx_mori]
GO:0005576 C extracellular region
6801 O_BomoMSG16121_complete:A_BomoMSG_c25396_g1_i5
132bp
6802 O_BomoMSG16122_5prime_partial:A_BomoMSG_c25396_g1_i5
107bp
6803 O_BomoMSG16123_internal:A_BomoMSG_c25396_g1_i6
181bp
 sericin_1-like_isoform_X3_[Bombyx_mori]
GO:0005576 C extracellular region
6804 O_BomoMSG16124_3prime_partial:A_BomoMSG_c25396_g1_i6
128bp
6805 O_BomoMSG16125_internal:A_BomoMSG_c25396_g2_i1
219bp
 sericin_1A'_[Bombyx_mori]
GO:0005576 C extracellular region
6806 O_BomoMSG16126_3prime_partial:A_BomoMSG_c25397_g1_i1
323bp
 uncharacterized_protein_LOC101745604_isoform_X1_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010792 P DNA double-strand break processing involved in repair via single-strand annealing
GO:0034599 P cellular response to oxidative stress
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045002 P double-strand break repair via single-strand annealing
GO:2000819 P regulation of nucleotide-excision repair
6807 O_BomoMSG16127_internal:A_BomoMSG_c25397_g1_i2
262bp
 DNA_repair_protein_RAD52_homolog_isoform_X4_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010792 P DNA double-strand break processing involved in repair via single-strand annealing
GO:0034599 P cellular response to oxidative stress
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045002 P double-strand break repair via single-strand annealing
GO:2000819 P regulation of nucleotide-excision repair
6808 O_BomoMSG16128_internal:A_BomoMSG_c25397_g1_i3
237bp
 DNA_repair_protein_RAD52_homolog_isoform_X4_[Bombyx_mori]
6809 O_BomoMSG16129_5prime_partial:A_BomoMSG_c25398_g1_i1
496bp
 uncharacterized_protein_LOC101736189_[Bombyx_mori]
6810 O_BomoMSG1612_complete:A_BomoMSG_c7811_g1_i1
143bp
 hypothetical_protein_[Meteorus_pulchricornis]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
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