Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
6511	O_BomoMSG15861_complete:A_BomoMSG_c25300_g1_i2 433bp	Bomo_Chr25	protein_pellino_[Bombyx_mori]	GO:0005575 C cellular_component GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006952 P defense response GO:0006955 P immune response GO:0007165 P signal transduction GO:0008063 P Toll signaling pathway GO:0008348 P negative regulation of antimicrobial humoral response GO:0019207 F kinase regulator activity GO:0042325 P regulation of phosphorylation GO:0045751 P negative regulation of Toll signaling pathway GO:1902524 P positive regulation of protein K48-linked ubiquitination
6512	O_BomoMSG15862_complete:A_BomoMSG_c25300_g1_i2 108bp	Bomo_Chr25
6513	O_BomoMSG15863_3prime_partial:A_BomoMSG_c25301_g1_i1 398bp	Bomo_Chr13	uncharacterized_protein_LOC101737353_[Bombyx_mori]
6514	O_BomoMSG15864_3prime_partial:A_BomoMSG_c25301_g1_i2 410bp	Bomo_Chr13	uncharacterized_protein_LOC101737353_[Bombyx_mori]
6515	O_BomoMSG15865_complete:A_BomoMSG_c25302_g1_i3 154bp	Bomo_Chr26	mitochondrial_28S_ribosomal_protein_S18c_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005763 C mitochondrial small ribosomal subunit GO:0005840 C ribosome GO:0006412 P translation GO:0022627 C cytosolic small ribosomal subunit GO:0030529 C ribonucleoprotein complex GO:0032543 P mitochondrial translation GO:0070124 P mitochondrial translational initiation GO:0070125 P mitochondrial translational elongation
6516	O_BomoMSG15866_complete:A_BomoMSG_c25302_g1_i4 138bp	Bomo_Chr26	mitochondrial_28S_ribosomal_protein_S18c_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005763 C mitochondrial small ribosomal subunit GO:0005840 C ribosome GO:0006412 P translation GO:0022627 C cytosolic small ribosomal subunit GO:0030529 C ribonucleoprotein complex GO:0032543 P mitochondrial translation GO:0070124 P mitochondrial translational initiation GO:0070125 P mitochondrial translational elongation
6517	O_BomoMSG15867_internal:A_BomoMSG_c25302_g5_i2 116bp	Bomo_Chr3
6518	O_BomoMSG15868_3prime_partial:A_BomoMSG_c25303_g1_i1 279bp	Bomo_Chr24	protein_mahjong_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0005634 C nucleus GO:0016567 P protein ubiquitination GO:0035212 P cell competition in a multicellular organism
6519	O_BomoMSG15869_complete:A_BomoMSG_c25305_g1_i1 541bp	Bomo_Chr14	probable_ATP-dependent_RNA_helicase_Dbp45A_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0010501 P RNA secondary structure unwinding GO:0016787 F hydrolase activity
6520	O_BomoMSG1586_3prime_partial:A_BomoMSG_c7746_g1_i1 173bp	Bomo_Chr13	eukaryotic_translation_initiation_factor_4_gamma_2_[Bombyx_mori]	GO:0003723 F RNA binding GO:0003743 F translation initiation factor activity GO:0006412 P translation GO:0006413 P translational initiation GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0008135 F translation factor activity, RNA binding GO:0016281 C eukaryotic translation initiation factor 4F complex
6521	O_BomoMSG15870_complete:A_BomoMSG_c25305_g1_i1 115bp	Bomo_Chr14
6522	O_BomoMSG15871_complete:A_BomoMSG_c25306_g1_i1 478bp	Bomo_Chr5	rab11_family-interacting_protein_1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0006810 P transport GO:0015031 P protein transport GO:0016020 C membrane GO:0017137 F small GTPase binding GO:0030670 C phagocytic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0043231 C intracellular membrane-bounded organelle GO:0045055 P regulated exocytosis GO:0055037 C recycling endosome GO:0070164 P negative regulation of adiponectin secretion
6523	O_BomoMSG15872_complete:A_BomoMSG_c25306_g1_i1 144bp	Bomo_Chr5
6524	O_BomoMSG15873_3prime_partial:A_BomoMSG_c25308_g1_i1 502bp	Bomo_Chr12	uncharacterized_protein_LOC110384429_[Helicoverpa_armigera]	GO:0000118 C histone deacetylase complex GO:0003677 F DNA binding GO:0003713 F transcription coactivator activity GO:0004402 F histone acetyltransferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006352 P DNA-templated transcription, initiation GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0030914 C SAGA complex GO:0043966 P histone H3 acetylation GO:0046982 F protein heterodimerization activity GO:0051090 P regulation of DNA-binding transcription factor activity GO:0070062 C extracellular exosome
6525	O_BomoMSG15874_complete:A_BomoMSG_c25308_g1_i1 128bp	Bomo_Chr12
6526	O_BomoMSG15875_internal:A_BomoMSG_c25309_g1_i1 162bp	Bomo_Chr5	phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]
6527	O_BomoMSG15876_3prime_partial:A_BomoMSG_c25309_g1_i2 334bp	Bomo_Chr5	phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]	GO:0003713 F transcription coactivator activity GO:0005634 C nucleus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0008195 F phosphatidate phosphatase activity GO:0009062 P fatty acid catabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0019432 P triglyceride biosynthetic process GO:0045944 P positive regulation of transcription by RNA polymerase II
6528	O_BomoMSG15877_3prime_partial:A_BomoMSG_c25309_g1_i2 99bp	Bomo_Chr5
6529	O_BomoMSG15878_3prime_partial:A_BomoMSG_c25309_g1_i3 334bp	Bomo_Chr5	phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]	GO:0003713 F transcription coactivator activity GO:0005634 C nucleus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0008195 F phosphatidate phosphatase activity GO:0009062 P fatty acid catabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0019432 P triglyceride biosynthetic process GO:0045944 P positive regulation of transcription by RNA polymerase II
6530	O_BomoMSG15879_3prime_partial:A_BomoMSG_c25311_g1_i1 472bp	Bomo_Chr5	U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006396 P RNA processing
6531	O_BomoMSG1587_5prime_partial:A_BomoMSG_c7746_g1_i1 118bp	Bomo_Chr13
6532	O_BomoMSG15880_3prime_partial:A_BomoMSG_c25311_g1_i2 472bp	Bomo_Chr5	U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006396 P RNA processing
6533	O_BomoMSG15881_3prime_partial:A_BomoMSG_c25311_g1_i3 237bp	Bomo_Chr5	U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006396 P RNA processing
6534	O_BomoMSG15882_3prime_partial:A_BomoMSG_c25312_g1_i1 243bp	Bomo_Chr12	uncharacterized_protein_LOC101743642_isoform_X1_[Bombyx_mori]
6535	O_BomoMSG15883_complete:A_BomoMSG_c25312_g1_i3 112bp	Bomo_Chr12	uncharacterized_protein_LOC101743642_isoform_X1_[Bombyx_mori]
6536	O_BomoMSG15884_complete:A_BomoMSG_c25316_g6_i1 288bp	Bomo_Chr22	27_kDa_glycoprotein-like_[Bombyx_mori]	GO:0005576 C extracellular region
6537	O_BomoMSG15885_5prime_partial:A_BomoMSG_c25316_g7_i1 168bp	Bomo_Chr16	nuclear_pore_complex_protein_Nup88_[Bombyx_mori]
6538	O_BomoMSG15886_3prime_partial:A_BomoMSG_c25316_g7_i1 139bp	Bomo_Chr16
6539	O_BomoMSG15887_5prime_partial:A_BomoMSG_c25316_g8_i1 260bp	Bomo_Chr2	WD_repeat-containing_protein_7-like_isoform_X1_[Bombyx_mori]	GO:0002244 P hematopoietic progenitor cell differentiation GO:0005515 F protein binding GO:0008021 C synaptic vesicle
6540	O_BomoMSG15888_3prime_partial:A_BomoMSG_c25316_g8_i1 129bp	Bomo_Chr2