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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
631 O_BomoMSG10569_5prime_partial:A_BomoMSG_c22768_g1_i2
331bp
632 O_BomoMSG1056_internal:A_BomoMSG_c4952_g1_i1
108bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HERC2-like_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
633 O_BomoMSG10570_complete:A_BomoMSG_c22768_g1_i2
136bp
634 O_BomoMSG10571_internal:A_BomoMSG_c22768_g1_i3
442bp
 F-actin-uncapping_protein_LRRC16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
635 O_BomoMSG10572_5prime_partial:A_BomoMSG_c22768_g1_i3
331bp
636 O_BomoMSG10573_complete:A_BomoMSG_c22768_g1_i3
136bp
637 O_BomoMSG10574_complete:A_BomoMSG_c22770_g1_i1
596bp
 uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
638 O_BomoMSG10575_complete:A_BomoMSG_c22770_g1_i2
591bp
 uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
639 O_BomoMSG10576_complete:A_BomoMSG_c22770_g1_i3
596bp
 uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
640 O_BomoMSG10577_5prime_partial:A_BomoMSG_c22770_g1_i4
453bp
 uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
641 O_BomoMSG10578_internal:A_BomoMSG_c22773_g1_i1
184bp
 protein_cramped_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
642 O_BomoMSG10579_internal:A_BomoMSG_c22773_g1_i2
319bp
 protein_cramped_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
643 O_BomoMSG1057_complete:A_BomoMSG_c4974_g1_i1
216bp
 thioredoxin_domain-containing_protein_9_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0030496 C midbody
GO:0045454 P cell redox homeostasis
644 O_BomoMSG10580_complete:A_BomoMSG_c22773_g1_i2
143bp
645 O_BomoMSG10581_5prime_partial:A_BomoMSG_c22773_g1_i2
117bp
646 O_BomoMSG10582_internal:A_BomoMSG_c22777_g1_i1
244bp
 probable_2-oxoglutarate_dehydrogenase_E1_component_DHKTD1_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004591 F oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016624 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 F thiamine pyrophosphate binding
GO:0045252 C oxoglutarate dehydrogenase complex
GO:0055114 P obsolete oxidation-reduction process
647 O_BomoMSG10583_internal:A_BomoMSG_c22778_g1_i1
475bp
 rho-associated_protein_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0007266 P Rho protein signal transduction
GO:0010825 P positive regulation of centrosome duplication
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035556 P intracellular signal transduction
GO:0042752 P regulation of circadian rhythm
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
648 O_BomoMSG10584_5prime_partial:A_BomoMSG_c22778_g1_i1
358bp
649 O_BomoMSG10585_complete:A_BomoMSG_c22778_g1_i1
130bp
650 O_BomoMSG10586_internal:A_BomoMSG_c22778_g1_i2
144bp
 rho-associated_protein_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0007266 P Rho protein signal transduction
GO:0010825 P positive regulation of centrosome duplication
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035556 P intracellular signal transduction
GO:0042752 P regulation of circadian rhythm
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
651 O_BomoMSG10587_internal:A_BomoMSG_c22778_g1_i2
144bp
652 O_BomoMSG10588_3prime_partial:A_BomoMSG_c22782_g1_i1
206bp
 putative_elongator_complex_protein_2_[Operophtera_brumata]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0010950 P positive regulation of endopeptidase activity
GO:0043248 P proteasome assembly
GO:0061133 F endopeptidase activator activity
653 O_BomoMSG10589_internal:A_BomoMSG_c22783_g2_i1
265bp
 tonsoku-like_protein_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
654 O_BomoMSG1058_complete:A_BomoMSG_c4974_g1_i1
110bp
655 O_BomoMSG10590_complete:A_BomoMSG_c22783_g2_i1
101bp
656 O_BomoMSG10591_3prime_partial:A_BomoMSG_c22784_g1_i1
261bp
 PREDICTED:_structure-specific_endonuclease_subunit_SLX1_homolog_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0033557 C Slx1-Slx4 complex
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
657 O_BomoMSG10592_internal:A_BomoMSG_c22784_g1_i3
113bp
 PREDICTED:_structure-specific_endonuclease_subunit_SLX1_homolog_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0033557 C Slx1-Slx4 complex
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
658 O_BomoMSG10593_5prime_partial:A_BomoMSG_c22790_g1_i1
223bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
659 O_BomoMSG10594_complete:A_BomoMSG_c22790_g1_i1
137bp
660 O_BomoMSG10595_3prime_partial:A_BomoMSG_c22791_g1_i1
172bp
 RB1-inducible_coiled-coil_protein_1_isoform_X2_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
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