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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6091 O_BomoMSG15483_complete:A_BomoMSG_c25154_g1_i1
216bp
6092 O_BomoMSG15484_3prime_partial:A_BomoMSG_c25154_g1_i1
206bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
6093 O_BomoMSG15485_5prime_partial:A_BomoMSG_c25154_g1_i1
206bp
6094 O_BomoMSG15486_complete:A_BomoMSG_c25154_g1_i1
155bp
6095 O_BomoMSG15487_5prime_partial:A_BomoMSG_c25154_g1_i1
133bp
6096 O_BomoMSG15488_5prime_partial:A_BomoMSG_c25154_g1_i1
126bp
6097 O_BomoMSG15489_complete:A_BomoMSG_c25154_g1_i1
112bp
6098 O_BomoMSG1548_internal:A_BomoMSG_c7569_g1_i2
103bp
6099 O_BomoMSG15490_3prime_partial:A_BomoMSG_c25154_g1_i2
627bp
 protein_SCAF8-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0043175 F RNA polymerase core enzyme binding
6100 O_BomoMSG15491_complete:A_BomoMSG_c25154_g1_i2
216bp
6101 O_BomoMSG15492_3prime_partial:A_BomoMSG_c25154_g1_i2
202bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
6102 O_BomoMSG15493_5prime_partial:A_BomoMSG_c25154_g1_i2
202bp
6103 O_BomoMSG15494_complete:A_BomoMSG_c25154_g1_i2
155bp
6104 O_BomoMSG15495_5prime_partial:A_BomoMSG_c25154_g1_i2
129bp
6105 O_BomoMSG15496_5prime_partial:A_BomoMSG_c25154_g1_i2
122bp
6106 O_BomoMSG15497_complete:A_BomoMSG_c25154_g1_i2
112bp
6107 O_BomoMSG15498_3prime_partial:A_BomoMSG_c25155_g1_i1
342bp
 nuclear_inhibitor_of_protein_phosphatase_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043086 P negative regulation of catalytic activity
GO:0050790 P regulation of catalytic activity
6108 O_BomoMSG15499_complete:A_BomoMSG_c25155_g1_i1
107bp
6109 O_BomoMSG1549_internal:A_BomoMSG_c7583_g1_i1
121bp
6110 O_BomoMSG154_3prime_partial:A_BomoMSG_c588_g1_i1
121bp
 multidrug_resistance-associated_protein_1_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0008514 F organic anion transmembrane transporter activity
GO:0015711 P organic anion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
6111 O_BomoMSG15500_internal:A_BomoMSG_c25155_g1_i2
233bp
 nuclear_inhibitor_of_protein_phosphatase_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043086 P negative regulation of catalytic activity
GO:0050790 P regulation of catalytic activity
6112 O_BomoMSG15501_complete:A_BomoMSG_c25155_g1_i2
105bp
6113 O_BomoMSG15502_3prime_partial:A_BomoMSG_c25156_g1_i1
284bp
 putative_deoxyribonuclease_TATDN1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004536 F deoxyribonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006308 P DNA catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6114 O_BomoMSG15503_complete:A_BomoMSG_c25157_g1_i1
823bp
 molybdenum_cofactor_sulfurase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006777 P Mo-molybdopterin cofactor biosynthetic process
GO:0008265 F Mo-molybdopterin cofactor sulfurase activity
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0030151 F molybdenum ion binding
GO:0030170 F pyridoxal phosphate binding
GO:0043545 P molybdopterin cofactor metabolic process
6115 O_BomoMSG15504_complete:A_BomoMSG_c25157_g1_i2
823bp
 molybdenum_cofactor_sulfurase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006777 P Mo-molybdopterin cofactor biosynthetic process
GO:0008265 F Mo-molybdopterin cofactor sulfurase activity
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0030151 F molybdenum ion binding
GO:0030170 F pyridoxal phosphate binding
GO:0043545 P molybdopterin cofactor metabolic process
6116 O_BomoMSG15505_5prime_partial:A_BomoMSG_c25159_g1_i1
425bp
 cystathionine_beta-synthase_[Bombyx_mori]
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
6117 O_BomoMSG15506_complete:A_BomoMSG_c25159_g1_i2
498bp
 cystathionine_beta-synthase_[Bombyx_mori]
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
6118 O_BomoMSG15507_5prime_partial:A_BomoMSG_c25159_g1_i3
399bp
 cystathionine_beta-synthase_[Bombyx_mori]
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
6119 O_BomoMSG15508_complete:A_BomoMSG_c25160_g1_i3
286bp
 uncharacterized_protein_LOC105841778_isoform_X1_[Bombyx_mori]
6120 O_BomoMSG15509_complete:A_BomoMSG_c25160_g1_i3
120bp
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