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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5851 O_BomoMSG15267_complete:A_BomoMSG_c25093_g1_i1
146bp
5852 O_BomoMSG15268_complete:A_BomoMSG_c25093_g1_i1
100bp
5853 O_BomoMSG15269_complete:A_BomoMSG_c25093_g1_i2
218bp
 ankyrin_repeat_domain-containing_protein_11_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
5854 O_BomoMSG1526_complete:A_BomoMSG_c7502_g1_i1
435bp
 ribosomal_protein_L4_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0051298 P centrosome duplication
5855 O_BomoMSG15270_complete:A_BomoMSG_c25093_g1_i3
582bp
 ankyrin_repeat_domain-containing_protein_11_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
5856 O_BomoMSG15271_complete:A_BomoMSG_c25093_g1_i3
146bp
5857 O_BomoMSG15272_complete:A_BomoMSG_c25093_g1_i3
100bp
5858 O_BomoMSG15273_5prime_partial:A_BomoMSG_c25093_g1_i4
377bp
 ankyrin_repeat_domain-containing_protein_11_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
5859 O_BomoMSG15274_complete:A_BomoMSG_c25093_g1_i5
582bp
 ankyrin_repeat_domain-containing_protein_11_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
5860 O_BomoMSG15275_complete:A_BomoMSG_c25093_g1_i5
146bp
5861 O_BomoMSG15276_complete:A_BomoMSG_c25093_g1_i5
100bp
5862 O_BomoMSG15277_5prime_partial:A_BomoMSG_c25094_g1_i1
175bp
5863 O_BomoMSG15278_3prime_partial:A_BomoMSG_c25094_g1_i1
151bp
 signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0031901 C early endosome membrane
GO:0033565 C ESCRT-0 complex
GO:0036258 P multivesicular body assembly
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
5864 O_BomoMSG15279_internal:A_BomoMSG_c25095_g1_i1
494bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
5865 O_BomoMSG1527_complete:A_BomoMSG_c7502_g1_i1
180bp
 hypothetical_protein_FF38_12815_[Lucilia_cuprina]
5866 O_BomoMSG15280_5prime_partial:A_BomoMSG_c25095_g1_i1
100bp
5867 O_BomoMSG15281_internal:A_BomoMSG_c25096_g1_i1
426bp
 LOW_QUALITY_PROTEIN:_protein_CLEC16A_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006914 P autophagy
GO:0010008 C endosome membrane
GO:0016020 C membrane
5868 O_BomoMSG15282_internal:A_BomoMSG_c25096_g1_i2
282bp
 LOW_QUALITY_PROTEIN:_protein_CLEC16A_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006914 P autophagy
GO:0010008 C endosome membrane
GO:0016020 C membrane
5869 O_BomoMSG15283_internal:A_BomoMSG_c25096_g1_i4
222bp
 LOW_QUALITY_PROTEIN:_protein_CLEC16A_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006914 P autophagy
GO:0010008 C endosome membrane
GO:0016020 C membrane
5870 O_BomoMSG15284_5prime_partial:A_BomoMSG_c25097_g1_i1
1444bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
5871 O_BomoMSG15285_complete:A_BomoMSG_c25097_g1_i1
392bp
5872 O_BomoMSG15286_complete:A_BomoMSG_c25097_g1_i1
223bp
5873 O_BomoMSG15287_complete:A_BomoMSG_c25097_g1_i1
213bp
5874 O_BomoMSG15288_complete:A_BomoMSG_c25097_g1_i1
185bp
5875 O_BomoMSG15289_complete:A_BomoMSG_c25097_g1_i1
118bp
5876 O_BomoMSG1528_internal:A_BomoMSG_c7503_g1_i1
161bp
 hypothetical_protein,_partial_[Bombyx_mori]
5877 O_BomoMSG15290_5prime_partial:A_BomoMSG_c25097_g1_i1
107bp
5878 O_BomoMSG15291_5prime_partial:A_BomoMSG_c25097_g1_i2
1492bp
 microtubule-actin_cross-linking_factor_1-like_isoform_X8_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
5879 O_BomoMSG15292_complete:A_BomoMSG_c25097_g1_i2
392bp
5880 O_BomoMSG15293_complete:A_BomoMSG_c25097_g1_i2
223bp
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