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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5791 O_BomoMSG15212_complete:A_BomoMSG_c25076_g1_i2
163bp
5792 O_BomoMSG15213_5prime_partial:A_BomoMSG_c25076_g1_i3
627bp
 solute_carrier_family_12_member_8_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
5793 O_BomoMSG15214_complete:A_BomoMSG_c25076_g1_i3
163bp
5794 O_BomoMSG15215_3prime_partial:A_BomoMSG_c25077_g1_i1
399bp
 DDB1-_and_CUL4-associated_factor_8_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
5795 O_BomoMSG15216_internal:A_BomoMSG_c25077_g1_i2
326bp
 DDB1-_and_CUL4-associated_factor_8_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
5796 O_BomoMSG15217_internal:A_BomoMSG_c25077_g1_i3
351bp
 DDB1-_and_CUL4-associated_factor_8_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
5797 O_BomoMSG15218_complete:A_BomoMSG_c25078_g1_i2
421bp
 uncharacterized_protein_LOC101744771_isoform_X1_[Bombyx_mori]
5798 O_BomoMSG15219_complete:A_BomoMSG_c25078_g1_i3
421bp
 uncharacterized_protein_LOC101744771_isoform_X1_[Bombyx_mori]
5799 O_BomoMSG1521_complete:A_BomoMSG_c7466_g1_i1
118bp
5800 O_BomoMSG15220_complete:A_BomoMSG_c25078_g1_i4
421bp
 uncharacterized_protein_LOC101744771_isoform_X1_[Bombyx_mori]
5801 O_BomoMSG15221_internal:A_BomoMSG_c25079_g1_i1
612bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
5802 O_BomoMSG15222_complete:A_BomoMSG_c25079_g1_i1
105bp
5803 O_BomoMSG15223_internal:A_BomoMSG_c25079_g1_i2
149bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
5804 O_BomoMSG15224_internal:A_BomoMSG_c25079_g1_i3
883bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0050793 P regulation of developmental process
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
5805 O_BomoMSG15225_complete:A_BomoMSG_c25079_g1_i3
110bp
5806 O_BomoMSG15226_complete:A_BomoMSG_c25079_g1_i3
105bp
5807 O_BomoMSG15227_internal:A_BomoMSG_c25079_g1_i4
124bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
5808 O_BomoMSG15228_complete:A_BomoMSG_c25081_g1_i1
189bp
 uncharacterized_protein_LOC101743665_[Bombyx_mori]
5809 O_BomoMSG15229_internal:A_BomoMSG_c25082_g1_i1
360bp
 LIM_domain_only_protein_7_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0023051 P regulation of signaling
GO:0030155 P regulation of cell adhesion
GO:0046872 F metal ion binding
5810 O_BomoMSG1522_internal:A_BomoMSG_c7487_g1_i1
102bp
 cuticular_protein_RR-1_motif_43_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
5811 O_BomoMSG15230_3prime_partial:A_BomoMSG_c25082_g1_i1
107bp
5812 O_BomoMSG15231_3prime_partial:A_BomoMSG_c25082_g1_i2
256bp
 LIM_domain_only_protein_7_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0023051 P regulation of signaling
GO:0030155 P regulation of cell adhesion
GO:0046872 F metal ion binding
5813 O_BomoMSG15232_3prime_partial:A_BomoMSG_c25082_g1_i2
107bp
5814 O_BomoMSG15233_internal:A_BomoMSG_c25082_g2_i1
143bp
 LIM_domain_only_protein_7_isoform_X2_[Bombyx_mori]
5815 O_BomoMSG15234_internal:A_BomoMSG_c25083_g1_i1
820bp
 eIF-2-alpha_kinase_activator_GCN1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
5816 O_BomoMSG15235_5prime_partial:A_BomoMSG_c25083_g1_i1
278bp
5817 O_BomoMSG15236_complete:A_BomoMSG_c25083_g1_i1
211bp
5818 O_BomoMSG15237_complete:A_BomoMSG_c25083_g1_i1
167bp
5819 O_BomoMSG15238_5prime_partial:A_BomoMSG_c25083_g1_i1
138bp
5820 O_BomoMSG15239_5prime_partial:A_BomoMSG_c25083_g1_i1
129bp
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