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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5401 O_BomoMSG14862_5prime_partial:A_BomoMSG_c24962_g1_i1
126bp
5402 O_BomoMSG14863_5prime_partial:A_BomoMSG_c24962_g1_i1
100bp
5403 O_BomoMSG14864_internal:A_BomoMSG_c24962_g1_i3
148bp
 PX_domain-containing_protein_kinase-like_protein_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006954 P inflammatory response
GO:0008022 F protein C-terminus binding
GO:0016020 C membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0035091 F phosphatidylinositol binding
GO:0042391 P regulation of membrane potential
GO:0043234 C protein-containing complex
GO:0043271 P negative regulation of ion transport
GO:0050804 P modulation of chemical synaptic transmission
5404 O_BomoMSG14865_5prime_partial:A_BomoMSG_c24962_g1_i3
126bp
5405 O_BomoMSG14866_internal:A_BomoMSG_c24962_g1_i4
355bp
 PX_domain-containing_protein_kinase-like_protein_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006954 P inflammatory response
GO:0008022 F protein C-terminus binding
GO:0016020 C membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0035091 F phosphatidylinositol binding
GO:0042391 P regulation of membrane potential
GO:0043234 C protein-containing complex
GO:0043271 P negative regulation of ion transport
GO:0050804 P modulation of chemical synaptic transmission
5406 O_BomoMSG14867_5prime_partial:A_BomoMSG_c24962_g1_i4
126bp
5407 O_BomoMSG14868_3prime_partial:A_BomoMSG_c24962_g2_i1
150bp
 PX_domain-containing_protein_kinase-like_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006954 P inflammatory response
GO:0008022 F protein C-terminus binding
GO:0016020 C membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0035091 F phosphatidylinositol binding
GO:0042391 P regulation of membrane potential
GO:0043234 C protein-containing complex
GO:0043271 P negative regulation of ion transport
GO:0050804 P modulation of chemical synaptic transmission
5408 O_BomoMSG14869_complete:A_BomoMSG_c24963_g1_i1
240bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
5409 O_BomoMSG1486_internal:A_BomoMSG_c7301_g1_i1
171bp
 tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
5410 O_BomoMSG14870_5prime_partial:A_BomoMSG_c24965_g2_i1
150bp
5411 O_BomoMSG14871_5prime_partial:A_BomoMSG_c24965_g2_i1
117bp
 ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034975 P protein folding in endoplasmic reticulum
GO:0072546 C EMC complex
5412 O_BomoMSG14872_5prime_partial:A_BomoMSG_c24966_g1_i1
226bp
 RNA-binding_protein_25_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
5413 O_BomoMSG14873_3prime_partial:A_BomoMSG_c24966_g1_i1
213bp
5414 O_BomoMSG14874_5prime_partial:A_BomoMSG_c24968_g1_i1
156bp
5415 O_BomoMSG14875_internal:A_BomoMSG_c24969_g1_i1
441bp
 filamin-A_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
5416 O_BomoMSG14876_complete:A_BomoMSG_c24969_g1_i1
116bp
5417 O_BomoMSG14877_complete:A_BomoMSG_c24969_g1_i1
103bp
5418 O_BomoMSG14878_internal:A_BomoMSG_c24969_g1_i3
553bp
 filamin-A_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
5419 O_BomoMSG14879_complete:A_BomoMSG_c24969_g1_i3
116bp
5420 O_BomoMSG1487_5prime_partial:A_BomoMSG_c7301_g1_i1
112bp
5421 O_BomoMSG14880_complete:A_BomoMSG_c24969_g1_i3
103bp
5422 O_BomoMSG14881_internal:A_BomoMSG_c24969_g1_i4
464bp
 filamin-A_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
5423 O_BomoMSG14882_complete:A_BomoMSG_c24969_g1_i4
116bp
5424 O_BomoMSG14883_complete:A_BomoMSG_c24969_g1_i4
103bp
5425 O_BomoMSG14884_internal:A_BomoMSG_c24969_g1_i5
106bp
 filamin-A_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
5426 O_BomoMSG14885_complete:A_BomoMSG_c24970_g1_i1
525bp
 uncharacterized_protein_LOC101743785_[Bombyx_mori]
5427 O_BomoMSG14886_complete:A_BomoMSG_c24970_g1_i2
525bp
 uncharacterized_protein_LOC101743785_[Bombyx_mori]
5428 O_BomoMSG14887_3prime_partial:A_BomoMSG_c24972_g1_i1
187bp
 THO_complex_subunit_7_homolog_isoform_X1_[Bombyx_mori]
GO:0000445 C THO complex part of transcription export complex
GO:0000446 C nucleoplasmic THO complex
GO:0000781 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0016607 C nuclear speck
5429 O_BomoMSG14888_5prime_partial:A_BomoMSG_c24973_g1_i1
142bp
 protein_N-terminal_asparagine_amidohydrolase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007613 P memory
GO:0008152 P metabolic process
GO:0008344 P adult locomotory behavior
GO:0008418 F protein-N-terminal asparagine amidohydrolase activity
GO:0016787 F hydrolase activity
5430 O_BomoMSG14889_5prime_partial:A_BomoMSG_c24974_g2_i1
149bp
 major_facilitator_superfamily_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
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