Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
5041	O_BomoMSG14538_5prime_partial:A_BomoMSG_c24847_g1_i3 201bp	Bomo_Chr13
5042	O_BomoMSG14539_5prime_partial:A_BomoMSG_c24847_g1_i3 193bp	Bomo_Chr13	phospholipase_D2_isoform_X3_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0003824 F catalytic activity GO:0004630 F phospholipase D activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005765 C lysosomal membrane GO:0005768 C endosome GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005794 C Golgi apparatus GO:0006629 P lipid metabolic process GO:0006654 P phosphatidic acid biosynthetic process GO:0006935 P chemotaxis GO:0007264 P small GTPase mediated signal transduction GO:0007265 P Ras protein signal transduction GO:0016020 C membrane GO:0016042 P lipid catabolic process GO:0016324 C apical plasma membrane GO:0016787 F hydrolase activity GO:0030139 C endocytic vesicle GO:0030334 P regulation of cell migration GO:0031902 C late endosome membrane GO:0032534 P regulation of microvillus assembly GO:0035091 F phosphatidylinositol binding GO:0048017 P inositol lipid-mediated signaling GO:0048471 C perinuclear region of cytoplasm GO:0048870 P cell motility GO:0050764 P regulation of phagocytosis GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
5043	O_BomoMSG1453_5prime_partial:A_BomoMSG_c7128_g1_i1 104bp	Bomo_Chr8
5044	O_BomoMSG14540_3prime_partial:A_BomoMSG_c24847_g1_i3 161bp	Bomo_Chr13
5045	O_BomoMSG14541_internal:A_BomoMSG_c24848_g1_i1 210bp	Bomo_Chr10	laccase-2_isoform_X2_[Bombyx_mori]	GO:0005507 F copper ion binding GO:0005576 C extracellular region GO:0016491 F oxidoreductase activity GO:0046274 P lignin catabolic process GO:0046872 F metal ion binding GO:0052716 F hydroquinone:oxygen oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
5046	O_BomoMSG14542_complete:A_BomoMSG_c24848_g2_i1 109bp	Bomo_Chr10	laccase-2_isoform_X2_[Bombyx_mori]	GO:0005507 F copper ion binding GO:0005576 C extracellular region GO:0016491 F oxidoreductase activity GO:0046274 P lignin catabolic process GO:0046872 F metal ion binding GO:0052716 F hydroquinone:oxygen oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
5047	O_BomoMSG14543_5prime_partial:A_BomoMSG_c24848_g2_i2 241bp	Bomo_Chr10	laccase-2_isoform_X2_[Bombyx_mori]	GO:0005507 F copper ion binding GO:0005576 C extracellular region GO:0016491 F oxidoreductase activity GO:0016722 F oxidoreductase activity, acting on metal ions GO:0046274 P lignin catabolic process GO:0046872 F metal ion binding GO:0048046 C apoplast GO:0052716 F hydroquinone:oxygen oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
5048	O_BomoMSG14544_complete:A_BomoMSG_c24849_g1_i1 217bp	Bomo_Chr15	phospholipid_phosphatase_6_isoform_X1_[Bombyx_mori]	GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity
5049	O_BomoMSG14545_3prime_partial:A_BomoMSG_c24850_g1_i1 344bp	Bomo_Chr26	cytochrome_P450_4V2_[Bombyx_mori]	GO:0001523 P retinoid metabolic process GO:0004497 F monooxygenase activity GO:0005506 F iron ion binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006629 P lipid metabolic process GO:0007601 P visual perception GO:0010430 P fatty acid omega-oxidation GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016125 P sterol metabolic process GO:0016491 F oxidoreductase activity GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 F heme binding GO:0046872 F metal ion binding GO:0050896 P response to stimulus GO:0055114 P obsolete oxidation-reduction process
5050	O_BomoMSG14546_5prime_partial:A_BomoMSG_c24850_g1_i1 107bp	Bomo_Chr26
5051	O_BomoMSG14547_internal:A_BomoMSG_c24850_g2_i1 108bp	Bomo_Chr26	cytochrome_P450_4V2_[Bombyx_mori]	GO:0004497 F monooxygenase activity GO:0005506 F iron ion binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0009055 F electron transfer activity GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 F heme binding GO:0031090 C organelle membrane GO:0043231 C intracellular membrane-bounded organelle GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
5052	O_BomoMSG14548_complete:A_BomoMSG_c24851_g1_i1 126bp	Bomo_Chr22
5053	O_BomoMSG14549_3prime_partial:A_BomoMSG_c24852_g1_i1 317bp	Bomo_Chr13	exocyst_complex_component_7_[Bombyx_mori]	GO:0000145 C exocyst GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding GO:0006810 P transport GO:0006887 P exocytosis GO:0007269 P neurotransmitter secretion GO:0008013 F beta-catenin binding GO:0015031 P protein transport GO:0016080 P synaptic vesicle targeting GO:0016081 P synaptic vesicle docking GO:0016192 P vesicle-mediated transport GO:0098793 C presynapse
5054	O_BomoMSG1454_internal:A_BomoMSG_c7137_g1_i1 117bp	Bomo_Chr5	protein_RRNAD1_[Bombyx_mori]	GO:0000154 P rRNA modification GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity GO:0008649 F rRNA methyltransferase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031167 P rRNA methylation GO:0032259 P methylation
5055	O_BomoMSG14550_3prime_partial:A_BomoMSG_c24853_g1_i1 487bp	Bomo_Chr11	zinc_finger_protein_879_isoform_X2_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
5056	O_BomoMSG14551_complete:A_BomoMSG_c24853_g1_i1 128bp	Bomo_Chr11
5057	O_BomoMSG14552_internal:A_BomoMSG_c24853_g1_i2 488bp	Bomo_Chr11	zinc_finger_protein_879_isoform_X2_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
5058	O_BomoMSG14553_complete:A_BomoMSG_c24853_g1_i2 128bp	Bomo_Chr11
5059	O_BomoMSG14554_3prime_partial:A_BomoMSG_c24854_g1_i2 155bp	Bomo_Chr11	LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005886 C plasma membrane GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015574 F trehalose transmembrane transporter activity GO:0015771 P trehalose transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
5060	O_BomoMSG14555_5prime_partial:A_BomoMSG_c24854_g2_i1 337bp	Bomo_Chr11	LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005886 C plasma membrane GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015574 F trehalose transmembrane transporter activity GO:0015771 P trehalose transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
5061	O_BomoMSG14556_5prime_partial:A_BomoMSG_c24854_g2_i2 378bp	Bomo_Chr11	LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005886 C plasma membrane GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015574 F trehalose transmembrane transporter activity GO:0015771 P trehalose transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
5062	O_BomoMSG14557_5prime_partial:A_BomoMSG_c24855_g2_i1 265bp	Bomo_Chr15	mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
5063	O_BomoMSG14558_complete:A_BomoMSG_c24855_g2_i1 131bp	Bomo_Chr15
5064	O_BomoMSG14559_3prime_partial:A_BomoMSG_c24856_g1_i2 295bp	Bomo_Chr24	uncharacterized_protein_LOC101738032_[Bombyx_mori]	GO:0000287 F magnesium ion binding GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0005634 C nucleus GO:0006259 P DNA metabolic process GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0008296 F 3'-5'-exodeoxyribonuclease activity GO:0008853 F exodeoxyribonuclease III activity GO:0016787 F hydrolase activity GO:0042803 F protein homodimerization activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5065	O_BomoMSG1455_internal:A_BomoMSG_c7149_g1_i1 165bp	Bomo_Chr15	mucin-5AC_[Bombyx_mori]
5066	O_BomoMSG14560_5prime_partial:A_BomoMSG_c24857_g1_i1 542bp	Bomo_Chr12	gastrula_zinc_finger_protein_XlCGF52.1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0007275 P multicellular organism development GO:0046872 F metal ion binding
5067	O_BomoMSG14561_complete:A_BomoMSG_c24857_g1_i1 175bp	Bomo_Chr12	hypothetical_protein_N320_13019,_partial_[Buceros_rhinoceros_silvestris]
5068	O_BomoMSG14562_5prime_partial:A_BomoMSG_c24857_g1_i2 410bp	Bomo_Chr12	gastrula_zinc_finger_protein_XlCGF52.1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
5069	O_BomoMSG14563_3prime_partial:A_BomoMSG_c24857_g1_i2 139bp	Bomo_Chr12	hypothetical_protein_N320_13019,_partial_[Buceros_rhinoceros_silvestris]
5070	O_BomoMSG14564_5prime_partial:A_BomoMSG_c24857_g1_i2 136bp	Bomo_Chr12