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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4831 O_BomoMSG14349_internal:A_BomoMSG_c24760_g2_i1
258bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Dufourea_novaeangliae]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4832 O_BomoMSG1434_internal:A_BomoMSG_c6958_g1_i1
108bp
 transcriptional_regulator_ATRX_[Bombyx_mori]
4833 O_BomoMSG14350_internal:A_BomoMSG_c24760_g3_i1
139bp
 PREDICTED:_uncharacterized_protein_LOC105663561_[Megachile_rotundata]
4834 O_BomoMSG14351_5prime_partial:A_BomoMSG_c24761_g1_i3
209bp
 uncharacterized_protein_LOC101743211_[Bombyx_mori]
4835 O_BomoMSG14352_3prime_partial:A_BomoMSG_c24761_g1_i3
153bp
4836 O_BomoMSG14353_3prime_partial:A_BomoMSG_c24761_g1_i3
148bp
4837 O_BomoMSG14354_5prime_partial:A_BomoMSG_c24761_g1_i3
107bp
4838 O_BomoMSG14355_5prime_partial:A_BomoMSG_c24761_g1_i4
322bp
 uncharacterized_protein_LOC101743211_[Bombyx_mori]
4839 O_BomoMSG14356_complete:A_BomoMSG_c24761_g1_i4
168bp
4840 O_BomoMSG14357_complete:A_BomoMSG_c24761_g1_i4
149bp
4841 O_BomoMSG14358_5prime_partial:A_BomoMSG_c24761_g1_i5
286bp
 uncharacterized_protein_LOC101743211_[Bombyx_mori]
4842 O_BomoMSG14359_complete:A_BomoMSG_c24761_g1_i5
168bp
4843 O_BomoMSG1435_complete:A_BomoMSG_c6972_g1_i1
515bp
 uncharacterized_protein_LOC101744102_[Bombyx_mori]
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0004777 F succinate-semialdehyde dehydrogenase (NAD+) activity
GO:0005739 C mitochondrion
GO:0006105 P succinate metabolic process
GO:0007417 P central nervous system development
GO:0008152 P metabolic process
GO:0009013 F succinate-semialdehyde dehydrogenase [NAD(P)+] activity
GO:0009450 P gamma-aminobutyric acid catabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0031406 F carboxylic acid binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4844 O_BomoMSG14360_complete:A_BomoMSG_c24761_g1_i5
149bp
4845 O_BomoMSG14361_internal:A_BomoMSG_c24762_g1_i1
315bp
 ESF1_homolog_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
4846 O_BomoMSG14362_3prime_partial:A_BomoMSG_c24762_g1_i2
476bp
 ESF1_homolog_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
4847 O_BomoMSG14363_5prime_partial:A_BomoMSG_c24765_g1_i1
165bp
 uncharacterized_protein_LOC110379548_[Helicoverpa_armigera]
4848 O_BomoMSG14364_5prime_partial:A_BomoMSG_c24765_g1_i1
149bp
 ubiquitin_carboxyl-terminal_hydrolase_20_isoform_X2_[Bombyx_mori]
4849 O_BomoMSG14365_5prime_partial:A_BomoMSG_c24765_g1_i2
146bp
 uncharacterized_protein_LOC110379548_[Helicoverpa_armigera]
4850 O_BomoMSG14366_5prime_partial:A_BomoMSG_c24765_g1_i2
130bp
 ubiquitin_carboxyl-terminal_hydrolase_20_isoform_X2_[Bombyx_mori]
4851 O_BomoMSG14367_5prime_partial:A_BomoMSG_c24765_g1_i3
234bp
 ubiquitin_carboxyl-terminal_hydrolase_20_isoform_X2_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007411 P axon guidance
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008277 P regulation of G protein-coupled receptor signaling pathway
GO:0016477 P cell migration
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051298 P centrosome duplication
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
4852 O_BomoMSG14368_3prime_partial:A_BomoMSG_c24765_g1_i3
100bp
4853 O_BomoMSG14369_5prime_partial:A_BomoMSG_c24766_g1_i1
209bp
4854 O_BomoMSG1436_internal:A_BomoMSG_c6980_g1_i1
151bp
 uncharacterized_protein_LOC101744180_[Bombyx_mori]
4855 O_BomoMSG14370_5prime_partial:A_BomoMSG_c24766_g1_i1
156bp
 ran-binding_protein_3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0046827 P positive regulation of protein export from nucleus
GO:0046907 P intracellular transport
GO:0070412 F R-SMAD binding
4856 O_BomoMSG14371_complete:A_BomoMSG_c24766_g1_i1
111bp
4857 O_BomoMSG14372_complete:A_BomoMSG_c24767_g1_i1
370bp
 mannose-1-phosphate_guanyltransferase_beta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004475 F mannose-1-phosphate guanylyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0009058 P biosynthetic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0035167 P larval lymph gland hemopoiesis
4858 O_BomoMSG14373_5prime_partial:A_BomoMSG_c24767_g1_i2
363bp
 mannose-1-phosphate_guanyltransferase_beta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004475 F mannose-1-phosphate guanylyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0009058 P biosynthetic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0035167 P larval lymph gland hemopoiesis
4859 O_BomoMSG14374_complete:A_BomoMSG_c24767_g1_i3
370bp
 mannose-1-phosphate_guanyltransferase_beta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004475 F mannose-1-phosphate guanylyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0009058 P biosynthetic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0035167 P larval lymph gland hemopoiesis
4860 O_BomoMSG14375_complete:A_BomoMSG_c24768_g2_i1
118bp
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