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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4651 O_BomoMSG14187_3prime_partial:A_BomoMSG_c24697_g1_i1
171bp
 unnamed_protein_product,_partial_[Bombyx_mori]
4652 O_BomoMSG14188_internal:A_BomoMSG_c24698_g1_i1
354bp
 tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
4653 O_BomoMSG14189_5prime_partial:A_BomoMSG_c24698_g1_i1
119bp
4654 O_BomoMSG1418_internal:A_BomoMSG_c6714_g1_i1
136bp
 probable_ATP-dependent_RNA_helicase_spindle-E_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
4655 O_BomoMSG14190_5prime_partial:A_BomoMSG_c24698_g1_i1
107bp
4656 O_BomoMSG14191_3prime_partial:A_BomoMSG_c24698_g1_i4
454bp
 tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
4657 O_BomoMSG14192_5prime_partial:A_BomoMSG_c24698_g1_i4
119bp
4658 O_BomoMSG14193_5prime_partial:A_BomoMSG_c24698_g1_i4
107bp
4659 O_BomoMSG14194_internal:A_BomoMSG_c24699_g1_i1
287bp
 integrator_complex_subunit_4_[Bombyx_mori]
GO:0005634 C nucleus
4660 O_BomoMSG14195_complete:A_BomoMSG_c24699_g1_i1
120bp
4661 O_BomoMSG14196_3prime_partial:A_BomoMSG_c24700_g1_i2
191bp
 WASH_complex_subunit_2-like,_partial_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0042147 P retrograde transport, endosome to Golgi
GO:0071203 C WASH complex
4662 O_BomoMSG14197_5prime_partial:A_BomoMSG_c24703_g1_i2
973bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741510_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0022416 P chaeta development
GO:0035071 P salivary gland cell autophagic cell death
GO:0035220 P wing disc development
GO:0045169 C fusome
GO:0048102 P autophagic cell death
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0098595 C perivitelline space
4663 O_BomoMSG14198_3prime_partial:A_BomoMSG_c24703_g2_i1
826bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741510_[Bombyx_mori]
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
4664 O_BomoMSG14199_5prime_partial:A_BomoMSG_c24705_g2_i1
454bp
 polycomb_protein_Sfmbt_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007446 P imaginal disc growth
GO:0008270 F zinc ion binding
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0031519 C PcG protein complex
GO:0035064 F methylated histone binding
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
4665 O_BomoMSG1419_3prime_partial:A_BomoMSG_c6741_g1_i1
128bp
 uncharacterized_protein_LOC101743655_isoform_X1_[Bombyx_mori]
4666 O_BomoMSG141_3prime_partial:A_BomoMSG_c536_g1_i1
216bp
 uncharacterized_protein_LOC110373622_[Helicoverpa_armigera]
4667 O_BomoMSG14200_complete:A_BomoMSG_c24705_g2_i1
133bp
4668 O_BomoMSG14201_5prime_partial:A_BomoMSG_c24705_g2_i2
160bp
 polycomb_protein_Sfmbt_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007446 P imaginal disc growth
GO:0008270 F zinc ion binding
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0031519 C PcG protein complex
GO:0035064 F methylated histone binding
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
4669 O_BomoMSG14202_3prime_partial:A_BomoMSG_c24706_g1_i1
503bp
 vacuolar_protein_sorting-associated_protein_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005769 C early endosome
GO:0008270 F zinc ion binding
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0046872 F metal ion binding
4670 O_BomoMSG14203_3prime_partial:A_BomoMSG_c24707_g1_i1
284bp
 integrin_alpha-PS2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
4671 O_BomoMSG14204_internal:A_BomoMSG_c24707_g1_i2
1126bp
 integrin_alpha-PS2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
4672 O_BomoMSG14205_complete:A_BomoMSG_c24707_g1_i2
183bp
4673 O_BomoMSG14206_complete:A_BomoMSG_c24707_g1_i2
130bp
4674 O_BomoMSG14207_3prime_partial:A_BomoMSG_c24707_g1_i3
1427bp
 integrin_alpha-PS2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
4675 O_BomoMSG14208_complete:A_BomoMSG_c24707_g1_i3
183bp
4676 O_BomoMSG14209_complete:A_BomoMSG_c24707_g1_i3
130bp
4677 O_BomoMSG1420_5prime_partial:A_BomoMSG_c6756_g1_i1
150bp
 pancreatic_lipase-related_protein_2_[Bombyx_mori]
4678 O_BomoMSG14210_internal:A_BomoMSG_c24707_g1_i4
466bp
 integrin_alpha-PS2_[Bombyx_mori]
4679 O_BomoMSG14211_3prime_partial:A_BomoMSG_c24707_g1_i4
153bp
4680 O_BomoMSG14212_5prime_partial:A_BomoMSG_c24709_g1_i2
285bp
 uridine-cytidine_kinase-like_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
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