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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4591 O_BomoMSG14132_3prime_partial:A_BomoMSG_c24668_g1_i2
502bp
 probable_arginine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004814 F arginine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006420 P arginyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
4592 O_BomoMSG14133_complete:A_BomoMSG_c24670_g1_i1
348bp
 uncharacterized_protein_LOC101746834_[Bombyx_mori]
GO:0001923 P B-1 B cell differentiation
GO:0002020 F protease binding
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002237 P response to molecule of bacterial origin
GO:0002726 P positive regulation of T cell cytokine production
GO:0004197 F cysteine-type endopeptidase activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0008233 F peptidase activity
GO:0009620 P response to fungus
GO:0016567 P protein ubiquitination
GO:0016787 F hydrolase activity
GO:0019209 F kinase activator activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032449 C CBM complex
GO:0032743 P positive regulation of interleukin-2 production
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0042098 P T cell proliferation
GO:0042113 P B cell activation
GO:0042981 P regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 C protein-containing complex
GO:0043621 F protein self-association
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050852 P T cell receptor signaling pathway
GO:0050856 P regulation of T cell receptor signaling pathway
GO:0050870 P positive regulation of T cell activation
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051168 P nuclear export
GO:0051259 P protein complex oligomerization
4593 O_BomoMSG14134_3prime_partial:A_BomoMSG_c24671_g1_i1
377bp
 ephrin_type-B_receptor_1-B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0001771 P immunological synapse formation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005003 F ephrin receptor activity
GO:0005005 F transmembrane-ephrin receptor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008046 F axon guidance receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0021545 P cranial nerve development
GO:0021631 P optic nerve morphogenesis
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0022008 P neurogenesis
GO:0030010 P establishment of cell polarity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031290 P retinal ganglion cell axon guidance
GO:0031589 P cell-substrate adhesion
GO:0031901 C early endosome membrane
GO:0032403 F protein-containing complex binding
GO:0032433 C filopodium tip
GO:0042995 C cell projection
GO:0045121 C membrane raft
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
GO:0048013 P ephrin receptor signaling pathway
GO:0048593 P camera-type eye morphogenesis
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0051965 P positive regulation of synapse assembly
GO:0060326 P cell chemotaxis
GO:0060996 P dendritic spine development
GO:0060997 P dendritic spine morphogenesis
GO:0061351 P neural precursor cell proliferation
GO:0070062 C extracellular exosome
GO:0070372 P regulation of ERK1 and ERK2 cascade
GO:1901214 P regulation of neuron death
4594 O_BomoMSG14135_complete:A_BomoMSG_c24671_g1_i1
111bp
4595 O_BomoMSG14136_internal:A_BomoMSG_c24671_g1_i2
209bp
 ephrin_type-B_receptor_1-B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000902 P cell morphogenesis
GO:0001525 P angiogenesis
GO:0001655 P urogenital system development
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0004872 F signaling receptor activity
GO:0005003 F ephrin receptor activity
GO:0005005 F transmembrane-ephrin receptor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007612 P learning
GO:0008046 F axon guidance receptor activity
GO:0009887 P animal organ morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0021631 P optic nerve morphogenesis
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0022038 P corpus callosum development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031290 P retinal ganglion cell axon guidance
GO:0042472 P inner ear morphogenesis
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0048013 P ephrin receptor signaling pathway
GO:0048168 P regulation of neuronal synaptic plasticity
GO:0048170 P positive regulation of long-term neuronal synaptic plasticity
GO:0048593 P camera-type eye morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0050771 P negative regulation of axonogenesis
GO:0050878 P regulation of body fluid levels
GO:0051965 P positive regulation of synapse assembly
GO:0060021 P roof of mouth development
GO:0060996 P dendritic spine development
GO:0060997 P dendritic spine morphogenesis
GO:0071679 P commissural neuron axon guidance
4596 O_BomoMSG14137_complete:A_BomoMSG_c24671_g1_i2
111bp
4597 O_BomoMSG14138_internal:A_BomoMSG_c24674_g1_i1
113bp
 DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4598 O_BomoMSG14139_3prime_partial:A_BomoMSG_c24674_g1_i2
210bp
 DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4599 O_BomoMSG1413_internal:A_BomoMSG_c6699_g1_i1
157bp
 signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
4600 O_BomoMSG14140_5prime_partial:A_BomoMSG_c24675_g1_i1
580bp
 ralBP1-associated_Eps_domain-containing_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
4601 O_BomoMSG14141_complete:A_BomoMSG_c24675_g1_i2
679bp
 ralBP1-associated_Eps_domain-containing_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
4602 O_BomoMSG14142_5prime_partial:A_BomoMSG_c24675_g1_i3
271bp
 ralBP1-associated_Eps_domain-containing_protein_1_[Bombyx_mori]
4603 O_BomoMSG14143_5prime_partial:A_BomoMSG_c24675_g1_i4
602bp
 ralBP1-associated_Eps_domain-containing_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
4604 O_BomoMSG14144_5prime_partial:A_BomoMSG_c24678_g1_i1
126bp
4605 O_BomoMSG14145_complete:A_BomoMSG_c24679_g1_i1
245bp
 ociad_protein_isoform_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4606 O_BomoMSG14146_complete:A_BomoMSG_c24679_g1_i1
136bp
 cycle-like_factor_BmCyc_[Bombyx_mori]
4607 O_BomoMSG14147_5prime_partial:A_BomoMSG_c24681_g1_i2
238bp
 hypothetical_protein_RR48_14670_[Papilio_machaon]
4608 O_BomoMSG14148_5prime_partial:A_BomoMSG_c24682_g1_i1
298bp
 short-chain_dehydrogenease/reductase-like_[Bombyx_mori]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4609 O_BomoMSG14149_5prime_partial:A_BomoMSG_c24682_g2_i1
179bp
 uncharacterized_protein_LOC110373703_[Helicoverpa_armigera]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4610 O_BomoMSG1414_internal:A_BomoMSG_c6701_g1_i1
106bp
 nitrogen_permease_regulator_2-like_protein_isoform_X1_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005096 F GTPase activator activity
GO:0006468 P protein phosphorylation
GO:0032007 P negative regulation of TOR signaling
GO:0033673 P negative regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0043547 P positive regulation of GTPase activity
GO:1990130 C GATOR1 complex
4611 O_BomoMSG14150_complete:A_BomoMSG_c24682_g2_i2
258bp
 uncharacterized_protein_LOC110373703_[Helicoverpa_armigera]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4612 O_BomoMSG14151_3prime_partial:A_BomoMSG_c24685_g1_i1
312bp
 Bem46-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
4613 O_BomoMSG14152_complete:A_BomoMSG_c24685_g1_i1
121bp
4614 O_BomoMSG14153_complete:A_BomoMSG_c24686_g1_i1
146bp
 biogenesis_of_lysosome-related_organelles_complex_1_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0031083 C BLOC-1 complex
GO:0042803 F protein homodimerization activity
4615 O_BomoMSG14154_5prime_partial:A_BomoMSG_c24687_g1_i1
882bp
 protein_lingerer_isoform_X1_[Bombyx_mori]
4616 O_BomoMSG14155_3prime_partial:A_BomoMSG_c24687_g1_i1
255bp
4617 O_BomoMSG14156_5prime_partial:A_BomoMSG_c24687_g1_i1
104bp
4618 O_BomoMSG14157_complete:A_BomoMSG_c24687_g1_i2
949bp
 protein_lingerer_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
4619 O_BomoMSG14158_3prime_partial:A_BomoMSG_c24687_g1_i2
255bp
4620 O_BomoMSG14159_5prime_partial:A_BomoMSG_c24687_g1_i2
104bp
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