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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4231 O_BomoMSG13809_complete:A_BomoMSG_c24507_g1_i1
110bp
4232 O_BomoMSG1380_internal:A_BomoMSG_c6373_g1_i2
102bp
 Fanconi_anemia,_complementation_group_I_isoform_X2_[Bombyx_mori]
4233 O_BomoMSG13810_5prime_partial:A_BomoMSG_c24507_g1_i2
217bp
 transcription_factor_Sp4_isoform_X5_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001503 P ossification
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030183 P B cell differentiation
GO:0030217 P T cell differentiation
GO:0030218 P erythrocyte differentiation
GO:0030219 P megakaryocyte differentiation
GO:0030224 P monocyte differentiation
GO:0030324 P lung development
GO:0030851 P granulocyte differentiation
GO:0043353 P enucleate erythrocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048706 P embryonic skeletal system development
GO:0060216 P definitive hemopoiesis
4234 O_BomoMSG13811_complete:A_BomoMSG_c24507_g1_i2
110bp
4235 O_BomoMSG13812_5prime_partial:A_BomoMSG_c24507_g1_i5
327bp
 transcription_factor_Sp4_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001503 P ossification
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030183 P B cell differentiation
GO:0030217 P T cell differentiation
GO:0030218 P erythrocyte differentiation
GO:0030219 P megakaryocyte differentiation
GO:0030224 P monocyte differentiation
GO:0030324 P lung development
GO:0030851 P granulocyte differentiation
GO:0043353 P enucleate erythrocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048706 P embryonic skeletal system development
GO:0060216 P definitive hemopoiesis
4236 O_BomoMSG13813_complete:A_BomoMSG_c24507_g1_i5
110bp
4237 O_BomoMSG13814_internal:A_BomoMSG_c24508_g1_i1
397bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
4238 O_BomoMSG13815_complete:A_BomoMSG_c24508_g1_i2
515bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
4239 O_BomoMSG13816_5prime_partial:A_BomoMSG_c24510_g1_i1
230bp
 probable_nucleoporin_Nup58_isoform_X2_[Bombyx_mori]
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0008139 F nuclear localization sequence binding
GO:0015031 P protein transport
GO:0048812 P neuron projection morphogenesis
GO:0051028 P mRNA transport
4240 O_BomoMSG13817_5prime_partial:A_BomoMSG_c24511_g1_i1
173bp
 xylosyltransferase_oxt_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030158 F protein xylosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
4241 O_BomoMSG13818_complete:A_BomoMSG_c24512_g1_i1
158bp
 PREDICTED:_AP-1_complex_subunit_sigma-2_isoform_X2_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0050690 P regulation of defense response to virus by virus
4242 O_BomoMSG13819_complete:A_BomoMSG_c24512_g1_i2
153bp
 adaptor_protein_complex-1_sigma_subunit_transcript_a_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008542 P visual learning
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0036465 P synaptic vesicle recycling
GO:0043231 C intracellular membrane-bounded organelle
GO:0045444 P fat cell differentiation
GO:0050885 P neuromuscular process controlling balance
GO:0060612 P adipose tissue development
GO:0098793 C presynapse
4243 O_BomoMSG1381_internal:A_BomoMSG_c6374_g1_i1
197bp
4244 O_BomoMSG13820_5prime_partial:A_BomoMSG_c24514_g2_i2
473bp
 solute_carrier_family_2,_facilitated_glucose_transporter_member_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030864 C cortical actin cytoskeleton
GO:0032868 P response to insulin
GO:0043621 F protein self-association
GO:0055085 P transmembrane transport
GO:0071548 P response to dexamethasone
GO:1904659 P glucose transmembrane transport
4245 O_BomoMSG13821_complete:A_BomoMSG_c24514_g2_i2
111bp
4246 O_BomoMSG13822_5prime_partial:A_BomoMSG_c24514_g2_i3
375bp
 solute_carrier_family_2,_facilitated_glucose_transporter_member_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030864 C cortical actin cytoskeleton
GO:0032868 P response to insulin
GO:0043621 F protein self-association
GO:0055085 P transmembrane transport
GO:0071548 P response to dexamethasone
GO:1904659 P glucose transmembrane transport
4247 O_BomoMSG13823_5prime_partial:A_BomoMSG_c24514_g2_i3
132bp
4248 O_BomoMSG13824_complete:A_BomoMSG_c24514_g2_i4
431bp
 solute_carrier_family_2,_facilitated_glucose_transporter_member_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030864 C cortical actin cytoskeleton
GO:0032868 P response to insulin
GO:0043621 F protein self-association
GO:0055085 P transmembrane transport
GO:0071548 P response to dexamethasone
GO:1904659 P glucose transmembrane transport
4249 O_BomoMSG13825_complete:A_BomoMSG_c24514_g2_i4
111bp
4250 O_BomoMSG13826_3prime_partial:A_BomoMSG_c24517_g1_i1
315bp
 E3_ubiquitin-protein_ligase_UHRF1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010216 P maintenance of DNA methylation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042393 F histone binding
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0071158 P regulation of cell cycle
GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
4251 O_BomoMSG13827_3prime_partial:A_BomoMSG_c24520_g1_i1
230bp
 uncharacterized_protein_LOC110381036,_partial_[Helicoverpa_armigera]
4252 O_BomoMSG13828_internal:A_BomoMSG_c24520_g1_i2
285bp
 uncharacterized_protein_LOC110381036,_partial_[Helicoverpa_armigera]
4253 O_BomoMSG13829_internal:A_BomoMSG_c24520_g1_i3
311bp
 uncharacterized_protein_LOC110381036,_partial_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
4254 O_BomoMSG1382_internal:A_BomoMSG_c6374_g1_i1
197bp
 adenomatous_polyposis_coli_protein_isoform_X1_[Bombyx_mori]
4255 O_BomoMSG13830_internal:A_BomoMSG_c24522_g1_i1
405bp
 GPI_ethanolamine_phosphate_transferase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0051377 F mannose-ethanolamine phosphotransferase activity
4256 O_BomoMSG13831_3prime_partial:A_BomoMSG_c24522_g1_i2
103bp
 GPI_ethanolamine_phosphate_transferase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0051377 F mannose-ethanolamine phosphotransferase activity
4257 O_BomoMSG13832_5prime_partial:A_BomoMSG_c24527_g1_i1
185bp
 spermatogenesis-associated_protein_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007420 P brain development
GO:0030154 P cell differentiation
4258 O_BomoMSG13833_5prime_partial:A_BomoMSG_c24527_g1_i2
406bp
 spermatogenesis-associated_protein_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007420 P brain development
GO:0030154 P cell differentiation
4259 O_BomoMSG13834_complete:A_BomoMSG_c24527_g1_i2
162bp
 hypothetical_protein_CLUG_02837_[Clavispora_lusitaniae_ATCC_42720]
4260 O_BomoMSG13835_complete:A_BomoMSG_c24528_g1_i1
474bp
 proton-coupled_amino_acid_transporter_1_[Bombyx_mori]
GO:0005280 F amino acid:proton symporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:1902600 P proton transmembrane transport
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