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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3121 O_BomoMSG1280_5prime_partial:A_BomoMSG_c5799_g1_i1
109bp
3122 O_BomoMSG12810_3prime_partial:A_BomoMSG_c24044_g1_i2
158bp
 uncharacterized_protein_LOC101739753_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3123 O_BomoMSG12811_3prime_partial:A_BomoMSG_c24046_g2_i1
324bp
 KRAB-A_domain-containing_protein_2-like_[Helicoverpa_armigera]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015074 P DNA integration
3124 O_BomoMSG12812_complete:A_BomoMSG_c24048_g1_i1
123bp
3125 O_BomoMSG12813_5prime_partial:A_BomoMSG_c24048_g1_i1
121bp
 zinc_finger_protein_320_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3126 O_BomoMSG12814_complete:A_BomoMSG_c24052_g1_i2
326bp
 uncharacterized_protein_LOC101746198_[Bombyx_mori]
3127 O_BomoMSG12815_5prime_partial:A_BomoMSG_c24052_g1_i3
319bp
 uncharacterized_protein_LOC101746198_[Bombyx_mori]
3128 O_BomoMSG12816_internal:A_BomoMSG_c24054_g1_i2
520bp
 angiotensin-converting_enzyme_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3129 O_BomoMSG12817_3prime_partial:A_BomoMSG_c24056_g1_i1
160bp
 cullin-2_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
3130 O_BomoMSG12818_5prime_partial:A_BomoMSG_c24058_g1_i1
318bp
 organic_cation/carnitine_transporter_7_[Bombyx_mori]
GO:0005452 F inorganic anion exchanger activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0043252 P sodium-independent organic anion transport
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
3131 O_BomoMSG12819_complete:A_BomoMSG_c24058_g1_i1
231bp
3132 O_BomoMSG1281_internal:A_BomoMSG_c5800_g1_i1
221bp
 putative_uncharacterized_protein_DDB_G0282499_[Bombyx_mori]
3133 O_BomoMSG12820_complete:A_BomoMSG_c24058_g1_i2
438bp
 organic_cation/carnitine_transporter_7_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
3134 O_BomoMSG12821_complete:A_BomoMSG_c24058_g1_i2
231bp
3135 O_BomoMSG12822_3prime_partial:A_BomoMSG_c24058_g1_i2
109bp
3136 O_BomoMSG12823_complete:A_BomoMSG_c24058_g1_i3
502bp
 organic_cation/carnitine_transporter_7_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
3137 O_BomoMSG12824_complete:A_BomoMSG_c24058_g1_i3
231bp
3138 O_BomoMSG12825_complete:A_BomoMSG_c24058_g1_i3
126bp
3139 O_BomoMSG12826_complete:A_BomoMSG_c24058_g1_i4
300bp
 organic_cation/carnitine_transporter_7_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
3140 O_BomoMSG12827_complete:A_BomoMSG_c24058_g1_i4
126bp
3141 O_BomoMSG12828_complete:A_BomoMSG_c24059_g1_i1
583bp
 nuclear_pore_complex_protein_Nup50_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008536 F small GTPase binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
3142 O_BomoMSG12829_complete:A_BomoMSG_c24059_g1_i1
114bp
3143 O_BomoMSG1282_internal:A_BomoMSG_c5809_g1_i1
171bp
 uncharacterized_protein_LOC101745796_[Bombyx_mori]
3144 O_BomoMSG12830_3prime_partial:A_BomoMSG_c24060_g1_i1
430bp
 E3_ubiquitin-protein_ligase_CBL-B-B_[Bombyx_mori]
GO:0001784 F phosphotyrosine residue binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007166 P cell surface receptor signaling pathway
GO:0008270 F zinc ion binding
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016600 C flotillin complex
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0023051 P regulation of signaling
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0045453 P bone resorption
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048260 P positive regulation of receptor-mediated endocytosis
3145 O_BomoMSG12831_5prime_partial:A_BomoMSG_c24060_g1_i1
109bp
3146 O_BomoMSG12832_complete:A_BomoMSG_c24061_g1_i1
344bp
 uncharacterized_protein_LOC101745524_isoform_X1_[Bombyx_mori]
3147 O_BomoMSG12833_3prime_partial:A_BomoMSG_c24061_g1_i2
388bp
 uncharacterized_protein_LOC101745524_isoform_X2_[Bombyx_mori]
3148 O_BomoMSG12834_5prime_partial:A_BomoMSG_c24061_g1_i3
367bp
 uncharacterized_protein_LOC101745524_isoform_X1_[Bombyx_mori]
3149 O_BomoMSG12835_5prime_partial:A_BomoMSG_c24061_g1_i4
328bp
 uncharacterized_protein_LOC101745524_isoform_X2_[Bombyx_mori]
3150 O_BomoMSG12836_5prime_partial:A_BomoMSG_c24061_g1_i5
303bp
 uncharacterized_protein_LOC101745524_isoform_X3_[Bombyx_mori]
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