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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3031 O_BomoMSG12729_complete:A_BomoMSG_c23982_g1_i2
138bp
3032 O_BomoMSG1272_3prime_partial:A_BomoMSG_c5754_g1_i1
508bp
 protein_Peter_pan_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0001560 P regulation of cell growth by extracellular stimulus
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0044822 F RNA binding
3033 O_BomoMSG12730_internal:A_BomoMSG_c23984_g1_i1
148bp
 protein_ECT2_isoform_X3_[Bombyx_mori]
3034 O_BomoMSG12731_3prime_partial:A_BomoMSG_c23984_g1_i2
400bp
 protein_ECT2_isoform_X3_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0000910 P cytokinesis
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007399 P nervous system development
GO:0015031 P protein transport
GO:0017048 F small GTPase binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030496 C midbody
GO:0032147 P activation of protein kinase activity
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042307 P positive regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043547 P positive regulation of GTPase activity
GO:0045666 P positive regulation of neuron differentiation
GO:0045859 P regulation of protein kinase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051260 P protein homooligomerization
GO:0051301 P cell division
GO:0051988 P regulation of attachment of spindle microtubules to kinetochore
GO:0070301 P cellular response to hydrogen peroxide
GO:0070830 P bicellular tight junction assembly
GO:0071277 P cellular response to calcium ion
GO:0071479 P cellular response to ionizing radiation
GO:0072686 C mitotic spindle
GO:0090630 P activation of GTPase activity
GO:0097149 C centralspindlin complex
3035 O_BomoMSG12732_complete:A_BomoMSG_c23984_g1_i2
110bp
3036 O_BomoMSG12733_complete:A_BomoMSG_c23984_g1_i2
109bp
3037 O_BomoMSG12734_internal:A_BomoMSG_c23984_g2_i1
101bp
 protein_ECT2_isoform_X3_[Bombyx_mori]
3038 O_BomoMSG12735_internal:A_BomoMSG_c23985_g1_i1
188bp
 E3_SUMO-protein_ligase_NSE2_[Bombyx_mori]
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0030915 C Smc5-Smc6 complex
GO:0034184 P positive regulation of maintenance of mitotic sister chromatid cohesion
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0090398 P cellular senescence
3039 O_BomoMSG12736_complete:A_BomoMSG_c23985_g1_i1
141bp
3040 O_BomoMSG12737_5prime_partial:A_BomoMSG_c23986_g1_i1
141bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
3041 O_BomoMSG12738_internal:A_BomoMSG_c23986_g1_i2
134bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
3042 O_BomoMSG12739_5prime_partial:A_BomoMSG_c23986_g1_i3
529bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
3043 O_BomoMSG1273_5prime_partial:A_BomoMSG_c5756_g1_i1
162bp
 putative_Copia_protein_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3044 O_BomoMSG12740_complete:A_BomoMSG_c23986_g1_i3
108bp
3045 O_BomoMSG12741_complete:A_BomoMSG_c23989_g1_i2
162bp
 E3_ubiquitin-protein_ligase_AIP2-like_[Bombyx_mori]
3046 O_BomoMSG12742_internal:A_BomoMSG_c23992_g1_i1
142bp
 talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
3047 O_BomoMSG12743_internal:A_BomoMSG_c23992_g1_i2
337bp
 talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
3048 O_BomoMSG12744_5prime_partial:A_BomoMSG_c23992_g1_i2
145bp
3049 O_BomoMSG12745_complete:A_BomoMSG_c23992_g1_i2
143bp
3050 O_BomoMSG12746_internal:A_BomoMSG_c23992_g1_i3
131bp
 talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
3051 O_BomoMSG12747_internal:A_BomoMSG_c23992_g1_i4
428bp
 talin-1_isoform_X8_[Helicoverpa_armigera]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
3052 O_BomoMSG12748_complete:A_BomoMSG_c23992_g1_i4
150bp
3053 O_BomoMSG12749_complete:A_BomoMSG_c23992_g1_i4
143bp
3054 O_BomoMSG1274_complete:A_BomoMSG_c5762_g1_i1
261bp
 proliferating_cell_nuclear_antigen_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0030337 F DNA polymerase processivity factor activity
3055 O_BomoMSG12750_internal:A_BomoMSG_c23997_g1_i1
325bp
 protein_virilizer_isoform_X6_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0036396 C RNA N6-methyladenosine methyltransferase complex
GO:0044822 F RNA binding
GO:0080009 P mRNA methylation
3056 O_BomoMSG12751_complete:A_BomoMSG_c23997_g1_i1
133bp
3057 O_BomoMSG12752_internal:A_BomoMSG_c23997_g2_i1
568bp
 protein_virilizer_isoform_X4_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
3058 O_BomoMSG12753_complete:A_BomoMSG_c23997_g2_i1
109bp
3059 O_BomoMSG12754_3prime_partial:A_BomoMSG_c23997_g2_i1
100bp
3060 O_BomoMSG12755_3prime_partial:A_BomoMSG_c23999_g1_i1
379bp
 LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
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