Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2821	O_BomoMSG1253_5prime_partial:A_BomoMSG_c5668_g1_i1 114bp	Bomo_Chr22
2822	O_BomoMSG12540_5prime_partial:A_BomoMSG_c23860_g1_i4 320bp	Bomo_Chr1	protein_phosphatase_1_regulatory_subunit_12C_isoform_X13_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0007165 P signal transduction GO:0008150 P biological_process GO:0019208 F phosphatase regulator activity GO:0019901 F protein kinase binding GO:0030018 C Z disc GO:0031672 C A band GO:0050790 P regulation of catalytic activity
2823	O_BomoMSG12541_3prime_partial:A_BomoMSG_c23860_g1_i4 193bp	Bomo_Chr1
2824	O_BomoMSG12542_complete:A_BomoMSG_c23860_g1_i4 141bp	Bomo_Chr1
2825	O_BomoMSG12543_3prime_partial:A_BomoMSG_c23861_g2_i1 285bp	Bomo_Chr10	leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]	GO:0016055 P Wnt signaling pathway
2826	O_BomoMSG12544_internal:A_BomoMSG_c23861_g2_i2 243bp	Bomo_Chr10	leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]	GO:0016055 P Wnt signaling pathway
2827	O_BomoMSG12545_5prime_partial:A_BomoMSG_c23863_g1_i1 512bp	Bomo_Chr25	DDB1-_and_CUL4-associated_factor_10_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2828	O_BomoMSG12546_complete:A_BomoMSG_c23866_g2_i1 130bp	Bomo_Chr24	PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]	GO:0004842 F ubiquitin-protein transferase activity GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006511 P ubiquitin-dependent protein catabolic process GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016055 P Wnt signaling pathway GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0038018 P Wnt receptor catabolic process GO:0046872 F metal ion binding GO:0072089 P stem cell proliferation GO:0090090 P negative regulation of canonical Wnt signaling pathway GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
2829	O_BomoMSG12547_complete:A_BomoMSG_c23866_g2_i2 130bp	Bomo_Chr24	PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]	GO:0004842 F ubiquitin-protein transferase activity GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006511 P ubiquitin-dependent protein catabolic process GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016055 P Wnt signaling pathway GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0038018 P Wnt receptor catabolic process GO:0046872 F metal ion binding GO:0072089 P stem cell proliferation GO:0090090 P negative regulation of canonical Wnt signaling pathway GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
2830	O_BomoMSG12548_complete:A_BomoMSG_c23867_g1_i1 774bp	Bomo_Chr7	AFG3-like_protein_2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004176 F ATP-dependent peptidase activity GO:0004222 F metalloendopeptidase activity GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006461 P protein-containing complex assembly GO:0006508 P proteolysis GO:0007005 P mitochondrion organization GO:0007409 P axonogenesis GO:0007528 P neuromuscular junction development GO:0008053 P mitochondrial fusion GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0021675 P nerve development GO:0031966 C mitochondrial membrane GO:0034982 P mitochondrial protein processing GO:0040014 P regulation of multicellular organism growth GO:0042407 P cristae formation GO:0042552 P myelination GO:0045041 P protein import into mitochondrial intermembrane space GO:0046872 F metal ion binding GO:0048747 P muscle cell development GO:0060013 P righting reflex
2831	O_BomoMSG12549_complete:A_BomoMSG_c23867_g1_i1 115bp	Bomo_Chr7	hypothetical_protein_BN3658_02298_[Coriobacteriaceae_bacterium_CHKCI002]
2832	O_BomoMSG1254_internal:A_BomoMSG_c5673_g1_i1 142bp	Bomo_Chr16	solute_carrier_family_35_member_G1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0051480 P regulation of cytosolic calcium ion concentration GO:1990034 P calcium ion export across plasma membrane
2833	O_BomoMSG12550_internal:A_BomoMSG_c23868_g1_i1 239bp	Bomo_Chr14	uncharacterized_protein_LOC105842932_[Bombyx_mori]
2834	O_BomoMSG12551_3prime_partial:A_BomoMSG_c23868_g2_i1 187bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC106647065_[Copidosoma_floridanum]
2835	O_BomoMSG12552_5prime_partial:A_BomoMSG_c23868_g2_i1 130bp	Bomo_Chr18	uncharacterized_protein_LOC105842932_[Bombyx_mori]
2836	O_BomoMSG12553_complete:A_BomoMSG_c23868_g2_i1 120bp	Bomo_Chr18	uncharacterized_protein_LOC101746650_[Bombyx_mori]
2837	O_BomoMSG12554_internal:A_BomoMSG_c23870_g1_i1 391bp	Bomo_Chr25	kelch-like_protein_26_isoform_X2_[Bombyx_mori]	GO:0001725 C stress fiber GO:0001726 C ruffle GO:0003779 F actin binding GO:0004842 F ubiquitin-protein transferase activity GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0015629 C actin cytoskeleton GO:0016567 P protein ubiquitination GO:0030027 C lamellipodium GO:0031463 C Cul3-RING ubiquitin ligase complex GO:0042803 F protein homodimerization activity GO:0042995 C cell projection
2838	O_BomoMSG12555_complete:A_BomoMSG_c23870_g1_i1 195bp	Bomo_Chr25
2839	O_BomoMSG12556_3prime_partial:A_BomoMSG_c23871_g1_i1 254bp	Bomo_Chr6	esterase_AGAP003155_[Bombyx_mori]
2840	O_BomoMSG12557_3prime_partial:A_BomoMSG_c23871_g1_i2 168bp	Bomo_Chr6	esterase_AGAP003155_[Bombyx_mori]
2841	O_BomoMSG12558_5prime_partial:A_BomoMSG_c23872_g1_i1 713bp	Bomo_Chr5	mitochondrial_intermediate_peptidase_isoform_X1_[Bombyx_mori]	GO:0004222 F metalloendopeptidase activity GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006508 P proteolysis GO:0006518 P peptide metabolic process GO:0006627 P protein processing involved in protein targeting to mitochondrion GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
2842	O_BomoMSG12559_complete:A_BomoMSG_c23872_g1_i2 702bp	Bomo_Chr5	mitochondrial_intermediate_peptidase_isoform_X2_[Bombyx_mori]	GO:0004222 F metalloendopeptidase activity GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006508 P proteolysis GO:0006518 P peptide metabolic process GO:0006627 P protein processing involved in protein targeting to mitochondrion GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
2843	O_BomoMSG1255_internal:A_BomoMSG_c5687_g1_i1 167bp	Bomo_Chr22	phosphatidate_cytidylyltransferase,_photoreceptor-specific_[Bombyx_mori]	GO:0004605 F phosphatidate cytidylyltransferase activity GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006629 P lipid metabolic process GO:0006655 P phosphatidylglycerol biosynthetic process GO:0008654 P phospholipid biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016024 P CDP-diacylglycerol biosynthetic process GO:0016740 F transferase activity GO:0016772 F transferase activity, transferring phosphorus-containing groups GO:0016779 F nucleotidyltransferase activity
2844	O_BomoMSG12560_5prime_partial:A_BomoMSG_c23873_g1_i1 142bp	Bomo_Chr13	Paired_box_protein_Pax-6_[Papilio_machaon]
2845	O_BomoMSG12561_complete:A_BomoMSG_c23874_g1_i1 200bp	Bomo_Chr16	uncharacterized_protein_LOC101744758_[Bombyx_mori]
2846	O_BomoMSG12562_internal:A_BomoMSG_c23876_g1_i1 168bp	Bomo_Chr28	structure-specific_endonuclease_subunit_SLX4_[Bombyx_mori]
2847	O_BomoMSG12563_internal:A_BomoMSG_c23876_g1_i2 212bp	Bomo_Chr28	structure-specific_endonuclease_subunit_SLX4_[Bombyx_mori]
2848	O_BomoMSG12564_internal:A_BomoMSG_c23876_g1_i3 336bp	Bomo_Chr28	structure-specific_endonuclease_subunit_SLX4_[Bombyx_mori]
2849	O_BomoMSG12565_3prime_partial:A_BomoMSG_c23876_g1_i4 265bp	Bomo_Chr28	structure-specific_endonuclease_subunit_SLX4_[Bombyx_mori]
2850	O_BomoMSG12566_3prime_partial:A_BomoMSG_c23880_g1_i1 252bp	Bomo_Chr5	15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004957 F prostaglandin E receptor activity GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0006693 P prostaglandin metabolic process GO:0007179 P transforming growth factor beta receptor signaling pathway GO:0007565 P female pregnancy GO:0007567 P parturition GO:0008152 P metabolic process GO:0016323 C basolateral plasma membrane GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity GO:0016491 F oxidoreductase activity GO:0030728 P ovulation GO:0045786 P negative regulation of cell cycle GO:0051287 F NAD binding GO:0055114 P obsolete oxidation-reduction process GO:0070062 C extracellular exosome GO:0070403 F NAD+ binding GO:0070493 P thrombin-activated receptor signaling pathway GO:0097070 P ductus arteriosus closure