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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2671 O_BomoMSG12404_5prime_partial:A_BomoMSG_c23783_g3_i1
1385bp
 LOW_QUALITY_PROTEIN:_titin_[Bombyx_mori]
2672 O_BomoMSG12405_internal:A_BomoMSG_c23785_g1_i1
458bp
 DNA_replication_licensing_factor_MCM4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007052 P mitotic spindle organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
2673 O_BomoMSG12406_5prime_partial:A_BomoMSG_c23785_g1_i1
163bp
2674 O_BomoMSG12407_5prime_partial:A_BomoMSG_c23786_g1_i1
377bp
 asparagine_synthetase_domain-containing_protein_CG17486_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
2675 O_BomoMSG12408_complete:A_BomoMSG_c23787_g1_i2
264bp
 protein_FAM151A_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2676 O_BomoMSG12409_5prime_partial:A_BomoMSG_c23787_g1_i3
179bp
 protein_FAM151A_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
2677 O_BomoMSG1240_internal:A_BomoMSG_c5610_g1_i1
136bp
 acetylcholinesterase_2,_partial_[Bombyx_mandarina]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
2678 O_BomoMSG12410_complete:A_BomoMSG_c23789_g1_i1
157bp
 proteolipid_protein_2_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2679 O_BomoMSG12411_complete:A_BomoMSG_c23789_g1_i2
157bp
 proteolipid_protein_2_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2680 O_BomoMSG12412_complete:A_BomoMSG_c23789_g1_i3
157bp
 proteolipid_protein_2_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2681 O_BomoMSG12413_complete:A_BomoMSG_c23789_g1_i4
157bp
 proteolipid_protein_2_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2682 O_BomoMSG12414_5prime_partial:A_BomoMSG_c23790_g1_i1
143bp
 probable_helicase_senataxin_isoform_X1_[Bombyx_mori]
2683 O_BomoMSG12415_internal:A_BomoMSG_c23790_g2_i1
235bp
 probable_helicase_senataxin_isoform_X1_[Bombyx_mori]
2684 O_BomoMSG12416_complete:A_BomoMSG_c23792_g1_i4
1181bp
 eukaryotic_translation_initiation_factor_5B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
2685 O_BomoMSG12417_complete:A_BomoMSG_c23792_g1_i4
112bp
2686 O_BomoMSG12418_complete:A_BomoMSG_c23792_g1_i4
109bp
2687 O_BomoMSG12419_complete:A_BomoMSG_c23793_g1_i1
595bp
 sulfhydryl_oxidase_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003756 F protein disulfide isomerase activity
GO:0005615 C extracellular space
GO:0005794 C Golgi apparatus
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016242 P negative regulation of macroautophagy
GO:0016491 F oxidoreductase activity
GO:0016971 F flavin-linked sulfhydryl oxidase activity
GO:0016972 F thiol oxidase activity
GO:0030173 C integral component of Golgi membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
2688 O_BomoMSG1241_internal:A_BomoMSG_c5613_g1_i1
207bp
 DNA_replication_complex_GINS_protein_PSF3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
2689 O_BomoMSG12420_internal:A_BomoMSG_c23794_g1_i2
237bp
 3-hydroxy-3-methylglutaryl-CoA_reductase_precursor_[Bombyx_mori]
GO:0004420 F hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008299 P isoprenoid biosynthetic process
GO:0015936 P coenzyme A metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050661 F NADP binding
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
2690 O_BomoMSG12421_5prime_partial:A_BomoMSG_c23795_g1_i1
415bp
 PREDICTED:_uncharacterized_protein_LOC106118787_[Papilio_xuthus]
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005886 C plasma membrane
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2691 O_BomoMSG12422_complete:A_BomoMSG_c23795_g1_i2
574bp
 trehalase-like_protein_[Heliconius_erato]
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005886 C plasma membrane
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2692 O_BomoMSG12423_internal:A_BomoMSG_c23796_g1_i1
324bp
 protein_virilizer_isoform_X6_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007539 P primary sex determination, soma
GO:0008380 P RNA splicing
2693 O_BomoMSG12424_5prime_partial:A_BomoMSG_c23796_g1_i1
109bp
2694 O_BomoMSG12425_3prime_partial:A_BomoMSG_c23798_g1_i1
234bp
 probable_serine_hydrolase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0007586 P digestion
GO:0008152 P metabolic process
GO:0009636 P response to toxic substance
GO:0016787 F hydrolase activity
GO:0017171 F serine hydrolase activity
GO:0019233 P sensory perception of pain
GO:0052689 F carboxylic ester hydrolase activity
2695 O_BomoMSG12426_3prime_partial:A_BomoMSG_c23798_g1_i2
316bp
 probable_serine_hydrolase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0007586 P digestion
GO:0008152 P metabolic process
GO:0009636 P response to toxic substance
GO:0016787 F hydrolase activity
GO:0017171 F serine hydrolase activity
GO:0019233 P sensory perception of pain
GO:0052689 F carboxylic ester hydrolase activity
2696 O_BomoMSG12427_complete:A_BomoMSG_c23798_g1_i2
112bp
2697 O_BomoMSG12428_internal:A_BomoMSG_c23798_g1_i4
117bp
 probable_serine_hydrolase_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0007586 P digestion
GO:0008152 P metabolic process
GO:0009636 P response to toxic substance
GO:0016787 F hydrolase activity
GO:0017171 F serine hydrolase activity
GO:0019233 P sensory perception of pain
GO:0052689 F carboxylic ester hydrolase activity
2698 O_BomoMSG12429_3prime_partial:A_BomoMSG_c23799_g1_i1
318bp
 uncharacterized_protein_LOC101739028_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2699 O_BomoMSG1242_internal:A_BomoMSG_c5615_g1_i1
103bp
 potassium_channel_subfamily_K_member_9_[Bombyx_mori]
2700 O_BomoMSG12430_complete:A_BomoMSG_c23799_g1_i1
113bp
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