Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2011	O_BomoMSG11810_internal:A_BomoMSG_c23465_g1_i2 201bp	Bomo_Chr23	helicase_SKI2W,_putative_[Plasmodium_malariae]
2012	O_BomoMSG11811_internal:A_BomoMSG_c23465_g1_i3 299bp	Bomo_Chr23	RNA_polymerase-associated_protein_CTR9_homolog_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016570 P histone modification GO:0016593 C Cdc73/Paf1 complex GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter GO:0035327 C euchromatin GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0051571 P positive regulation of histone H3-K4 methylation GO:0080182 P histone H3-K4 trimethylation
2013	O_BomoMSG11812_internal:A_BomoMSG_c23465_g1_i3 298bp	Bomo_Chr23
2014	O_BomoMSG11813_internal:A_BomoMSG_c23465_g1_i3 298bp	Bomo_Chr23	helicase_SKI2W,_putative_[Plasmodium_malariae]
2015	O_BomoMSG11814_5prime_partial:A_BomoMSG_c23465_g1_i3 104bp	Bomo_Chr23
2016	O_BomoMSG11815_internal:A_BomoMSG_c23467_g1_i1 241bp	Bomo_Chr4	uncharacterized_protein_LOC101744334_[Bombyx_mori]
2017	O_BomoMSG11816_3prime_partial:A_BomoMSG_c23468_g1_i1 211bp	Bomo_Chr13	MOB_kinase_activator-like_2,_partial_[Bombyx_mori]	GO:0000902 P cell morphogenesis GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0046872 F metal ion binding
2018	O_BomoMSG11817_5prime_partial:A_BomoMSG_c23468_g1_i1 154bp	Bomo_Chr13
2019	O_BomoMSG11818_3prime_partial:A_BomoMSG_c23468_g1_i2 211bp	Bomo_Chr13	MOB_kinase_activator-like_2,_partial_[Bombyx_mori]	GO:0000902 P cell morphogenesis GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0046872 F metal ion binding
2020	O_BomoMSG11819_5prime_partial:A_BomoMSG_c23468_g1_i2 154bp	Bomo_Chr13
2021	O_BomoMSG1181_internal:A_BomoMSG_c5489_g1_i1 108bp	Bomo_Chr3	PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]	GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity
2022	O_BomoMSG11820_internal:A_BomoMSG_c23468_g1_i3 283bp	Bomo_Chr13	MOB_kinase_activator-like_2_isoform_X1_[Helicoverpa_armigera]	GO:0000902 P cell morphogenesis GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0046872 F metal ion binding
2023	O_BomoMSG11821_5prime_partial:A_BomoMSG_c23468_g1_i3 154bp	Bomo_Chr13
2024	O_BomoMSG11822_internal:A_BomoMSG_c23468_g1_i4 263bp	Bomo_Chr13	MOB_kinase_activator-like_2,_partial_[Bombyx_mori]	GO:0000902 P cell morphogenesis GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0007611 P learning or memory GO:0007616 P long-term memory GO:0008355 P olfactory learning GO:0016028 C rhabdomere GO:0019901 F protein kinase binding GO:0042052 P rhabdomere development GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction GO:0046872 F metal ion binding GO:0070451 C cell hair GO:0071944 C cell periphery
2025	O_BomoMSG11823_5prime_partial:A_BomoMSG_c23468_g1_i4 173bp	Bomo_Chr13
2026	O_BomoMSG11824_5prime_partial:A_BomoMSG_c23468_g1_i4 154bp	Bomo_Chr13
2027	O_BomoMSG11825_5prime_partial:A_BomoMSG_c23468_g1_i4 115bp	Bomo_Chr13
2028	O_BomoMSG11826_internal:A_BomoMSG_c23468_g1_i6 250bp	Bomo_Chr13	MOB_kinase_activator-like_2,_partial_[Bombyx_mori]	GO:0000902 P cell morphogenesis GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0046872 F metal ion binding
2029	O_BomoMSG11827_5prime_partial:A_BomoMSG_c23468_g1_i6 160bp	Bomo_Chr13
2030	O_BomoMSG11828_5prime_partial:A_BomoMSG_c23468_g1_i6 154bp	Bomo_Chr13
2031	O_BomoMSG11829_5prime_partial:A_BomoMSG_c23468_g1_i6 102bp	Bomo_Chr13		GO:0003824 F catalytic activity GO:0009108 P obsolete coenzyme biosynthetic process GO:0009399 P nitrogen fixation GO:0046872 F metal ion binding GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding
2032	O_BomoMSG1182_internal:A_BomoMSG_c5490_g1_i1 123bp	Bomo_Chr25	potassium_channel_subfamily_K_member_9_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005252 F open rectifier potassium channel activity GO:0005267 F potassium channel activity GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006813 P potassium ion transport GO:0007420 P brain development GO:0008022 F protein C-terminus binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022841 F potassium ion leak channel activity GO:0030322 P stabilization of membrane potential GO:0034220 P ion transmembrane transport GO:0042493 P response to xenobiotic stimulus GO:0042803 F protein homodimerization activity GO:0044548 F S100 protein binding GO:0046982 F protein heterodimerization activity GO:0051481 P negative regulation of cytosolic calcium ion concentration GO:0071294 P cellular response to zinc ion GO:0071456 P cellular response to hypoxia GO:0071805 P potassium ion transmembrane transport GO:0090102 P cochlea development GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
2033	O_BomoMSG11830_3prime_partial:A_BomoMSG_c23468_g1_i7 211bp	Bomo_Chr13	MOB_kinase_activator-like_2,_partial_[Bombyx_mori]	GO:0000902 P cell morphogenesis GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0046872 F metal ion binding
2034	O_BomoMSG11831_5prime_partial:A_BomoMSG_c23468_g1_i7 154bp	Bomo_Chr13
2035	O_BomoMSG11832_complete:A_BomoMSG_c23469_g1_i1 354bp	Bomo_Chr24	eIF2B-beta_protein_[Bombyx_mori]	GO:0001541 P ovarian follicle development GO:0003743 F translation initiation factor activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005525 F GTP binding GO:0005737 C cytoplasm GO:0005851 C eukaryotic translation initiation factor 2B complex GO:0006412 P translation GO:0006413 P translational initiation GO:0006446 P regulation of translational initiation GO:0007417 P central nervous system development GO:0014003 P oligodendrocyte development GO:0019509 P L-methionine salvage from methylthioadenosine GO:0042552 P myelination GO:0043547 P positive regulation of GTPase activity GO:0044237 P cellular metabolic process GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity GO:0051716 P cellular response to stimulus
2036	O_BomoMSG11833_complete:A_BomoMSG_c23469_g1_i1 143bp	Bomo_Chr24
2037	O_BomoMSG11834_complete:A_BomoMSG_c23469_g1_i1 113bp	Bomo_Chr24
2038	O_BomoMSG11835_complete:A_BomoMSG_c23472_g1_i2 170bp	Bomo_Chr20	von_Hippel-Lindau-like_protein_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000902 P cell morphogenesis GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005783 C endoplasmic reticulum GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006508 P proteolysis GO:0008134 F transcription factor binding GO:0008285 P negative regulation of cell population proliferation GO:0016020 C membrane GO:0016567 P protein ubiquitination GO:0019899 F enzyme binding GO:0030891 C VCB complex GO:0043066 P negative regulation of apoptotic process GO:0045597 P positive regulation of cell differentiation GO:0045893 P positive regulation of transcription, DNA-templated GO:0050821 P protein stabilization GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061428 P negative regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061630 F ubiquitin protein ligase activity
2039	O_BomoMSG11836_5prime_partial:A_BomoMSG_c23472_g1_i3 138bp	Bomo_Chr20	von_Hippel-Lindau-like_protein_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000902 P cell morphogenesis GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005783 C endoplasmic reticulum GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006508 P proteolysis GO:0008134 F transcription factor binding GO:0008285 P negative regulation of cell population proliferation GO:0016020 C membrane GO:0016567 P protein ubiquitination GO:0019899 F enzyme binding GO:0030891 C VCB complex GO:0043066 P negative regulation of apoptotic process GO:0045597 P positive regulation of cell differentiation GO:0045893 P positive regulation of transcription, DNA-templated GO:0050821 P protein stabilization GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061428 P negative regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061630 F ubiquitin protein ligase activity
2040	O_BomoMSG11837_internal:A_BomoMSG_c23473_g1_i1 300bp	Bomo_Chr2	acetylglucosaminyltransferase_isoform_X1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0001701 P in utero embryonic development GO:0003827 F alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity GO:0005794 C Golgi apparatus GO:0006049 P UDP-N-acetylglucosamine catabolic process GO:0006486 P protein glycosylation GO:0008375 F acetylglucosaminyltransferase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0046872 F metal ion binding GO:0070062 C extracellular exosome GO:1903561 C extracellular vesicle