Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1651	O_BomoMSG11487_complete:A_BomoMSG_c23311_g1_i4 156bp	Bomo_Chr10
1652	O_BomoMSG11488_3prime_partial:A_BomoMSG_c23312_g1_i1 479bp	Bomo_Chr25	protein_sel-1_homolog_2_isoform_X1_[Bombyx_mori]	GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0007219 P Notch signaling pathway GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030970 P retrograde protein transport, ER to cytosol GO:0034976 P response to endoplasmic reticulum stress GO:0036503 P ERAD pathway GO:0036513 C Derlin-1 retrotranslocation complex
1653	O_BomoMSG11489_complete:A_BomoMSG_c23312_g1_i1 101bp	Bomo_Chr25
1654	O_BomoMSG1148_internal:A_BomoMSG_c5412_g1_i1 162bp	Bomo_Chr7	histone-lysine_N-methyltransferase_trithorax_[Bombyx_mori]
1655	O_BomoMSG11490_3prime_partial:A_BomoMSG_c23312_g1_i2 479bp	Bomo_Chr25	protein_sel-1_homolog_2_isoform_X1_[Bombyx_mori]	GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0007219 P Notch signaling pathway GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030970 P retrograde protein transport, ER to cytosol GO:0034976 P response to endoplasmic reticulum stress GO:0036503 P ERAD pathway GO:0036513 C Derlin-1 retrotranslocation complex
1656	O_BomoMSG11491_complete:A_BomoMSG_c23312_g1_i2 101bp	Bomo_Chr25
1657	O_BomoMSG11492_internal:A_BomoMSG_c23312_g1_i3 108bp	Bomo_Chr25	protein_sel-1_homolog_1_isoform_X3_[Bombyx_mori]	GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0007219 P Notch signaling pathway GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030970 P retrograde protein transport, ER to cytosol GO:0034976 P response to endoplasmic reticulum stress GO:0036503 P ERAD pathway GO:0036513 C Derlin-1 retrotranslocation complex
1658	O_BomoMSG11493_3prime_partial:A_BomoMSG_c23313_g1_i1 158bp	Bomo_Chr1	serine/threonine-protein_kinase_tricorner_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005938 C cell cortex GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0007476 P imaginal disc-derived wing morphogenesis GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018105 P peptidyl-serine phosphorylation GO:0022416 P chaeta development GO:0030424 C axon GO:0030425 C dendrite GO:0035317 P imaginal disc-derived wing hair organization GO:0035556 P intracellular signal transduction GO:0040018 P positive regulation of multicellular organism growth GO:0044297 C cell body GO:0046872 F metal ion binding GO:0048800 P antennal morphogenesis GO:0048813 P dendrite morphogenesis GO:0048814 P regulation of dendrite morphogenesis GO:0050773 P regulation of dendrite development GO:0070451 C cell hair GO:0070593 P dendrite self-avoidance GO:0071944 C cell periphery
1659	O_BomoMSG11494_5prime_partial:A_BomoMSG_c23313_g2_i1 310bp	Bomo_Chr1	serine/threonine-protein_kinase_tricorner_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035556 P intracellular signal transduction GO:0046872 F metal ion binding GO:0050773 P regulation of dendrite development
1660	O_BomoMSG11495_5prime_partial:A_BomoMSG_c23313_g2_i1 144bp	Bomo_Chr1
1661	O_BomoMSG11496_complete:A_BomoMSG_c23313_g2_i1 122bp	Bomo_Chr1
1662	O_BomoMSG11497_3prime_partial:A_BomoMSG_c23315_g1_i1 172bp	Bomo_Chr15	nucleic-acid_binding_protein,_partial_[Bombyx_mori]
1663	O_BomoMSG11498_internal:A_BomoMSG_c23316_g1_i1 158bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC105392658_[Plutella_xylostella]
1664	O_BomoMSG11499_5prime_partial:A_BomoMSG_c23316_g1_i1 111bp	Bomo_Chr5
1665	O_BomoMSG1149_3prime_partial:A_BomoMSG_c5414_g1_i1 104bp	Bomo_Chr22	interferon-related_developmental_regulator_2_[Bombyx_mori]
1666	O_BomoMSG114_internal:A_BomoMSG_c413_g1_i1 170bp	Bomo_Chr11	PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding GO:0001111 P promoter clearance from RNA polymerase II promoter GO:0001113 P transcription open complex formation at RNA polymerase II promoter GO:0003677 F DNA binding GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005675 C transcription factor TFIIH holo complex GO:0006281 P DNA repair GO:0006289 P nucleotide-excision repair GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006974 P cellular response to DNA damage stimulus GO:0009411 P response to UV GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding GO:0043140 F 3'-5' DNA helicase activity GO:1903506 P regulation of nucleic acid-templated transcription
1667	O_BomoMSG11500_internal:A_BomoMSG_c23316_g1_i2 244bp	Bomo_Chr7	PREDICTED:_uncharacterized_protein_LOC105392658_[Plutella_xylostella]
1668	O_BomoMSG11501_5prime_partial:A_BomoMSG_c23316_g1_i2 111bp	Bomo_Chr7
1669	O_BomoMSG11502_3prime_partial:A_BomoMSG_c23316_g1_i3 181bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC105392658_[Plutella_xylostella]
1670	O_BomoMSG11503_5prime_partial:A_BomoMSG_c23316_g1_i3 111bp	Bomo_Chr24
1671	O_BomoMSG11504_3prime_partial:A_BomoMSG_c23318_g1_i1 479bp	Bomo_Chr22	sporulation-specific_protein_15_isoform_X2_[Bombyx_mori]
1672	O_BomoMSG11505_3prime_partial:A_BomoMSG_c23318_g1_i2 483bp	Bomo_Chr22	uncharacterized_protein_LOC101738570_isoform_X1_[Bombyx_mori]
1673	O_BomoMSG11506_internal:A_BomoMSG_c23318_g1_i3 481bp	Bomo_Chr22	sporulation-specific_protein_15_isoform_X2_[Bombyx_mori]
1674	O_BomoMSG11507_5prime_partial:A_BomoMSG_c23319_g1_i1 156bp	Bomo_Chr22
1675	O_BomoMSG11508_5prime_partial:A_BomoMSG_c23319_g1_i1 132bp	Bomo_Chr22
1676	O_BomoMSG11509_3prime_partial:A_BomoMSG_c23321_g1_i1 237bp	Bomo_Chr2	uncharacterized_protein_LOC101741550_[Bombyx_mori]
1677	O_BomoMSG1150_5prime_partial:A_BomoMSG_c5415_g1_i1 255bp	Bomo_Chr13	UPF0568_protein_C14orf166_homolog_[Bombyx_mori]	GO:0000993 F RNA polymerase II complex binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005815 C microtubule organizing center GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation GO:0042802 F identical protein binding GO:0044822 F RNA binding GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048471 C perinuclear region of cytoplasm GO:0072669 C tRNA-splicing ligase complex
1678	O_BomoMSG11510_5prime_partial:A_BomoMSG_c23321_g1_i1 116bp	Bomo_Chr2
1679	O_BomoMSG11511_complete:A_BomoMSG_c23321_g1_i1 100bp	Bomo_Chr2
1680	O_BomoMSG11512_3prime_partial:A_BomoMSG_c23321_g1_i2 237bp	Bomo_Chr2	uncharacterized_protein_LOC101741550_[Bombyx_mori]