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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1561 O_BomoMSG11405_complete:A_BomoMSG_c23277_g1_i1
143bp
 cytochrome_c_oxidase_assembly_protein_COX15_homolog_isoform_X3_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006784 P heme A biosynthetic process
GO:0008535 P respiratory chain complex IV assembly
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0016653 F oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
1562 O_BomoMSG11406_complete:A_BomoMSG_c23277_g1_i1
133bp
1563 O_BomoMSG11407_3prime_partial:A_BomoMSG_c23277_g1_i2
369bp
 cytochrome_c_oxidase_assembly_protein_COX15_homolog_isoform_X3_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006784 P heme A biosynthetic process
GO:0008535 P respiratory chain complex IV assembly
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0016653 F oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
1564 O_BomoMSG11408_complete:A_BomoMSG_c23277_g1_i2
165bp
1565 O_BomoMSG11409_3prime_partial:A_BomoMSG_c23277_g1_i3
123bp
 cytochrome_c_oxidase_assembly_protein_COX15_homolog_isoform_X3_[Bombyx_mori]
1566 O_BomoMSG1140_complete:A_BomoMSG_c5380_g1_i1
249bp
 triosephosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0004807 F triose-phosphate isomerase activity
GO:0005575 C cellular_component
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0006098 P pentose-phosphate shunt
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
1567 O_BomoMSG11410_3prime_partial:A_BomoMSG_c23279_g1_i1
148bp
 GDP-fucose_transporter_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005456 F CMP-N-acetylneuraminate transmembrane transporter activity
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005458 F GDP-mannose transmembrane transporter activity
GO:0005459 F UDP-galactose transmembrane transporter activity
GO:0005460 F UDP-glucose transmembrane transporter activity
GO:0005461 F UDP-glucuronic acid transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005463 F UDP-N-acetylgalactosamine transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0006810 P transport
GO:0007625 P grooming behavior
GO:0008643 P carbohydrate transport
GO:0015782 P CMP-N-acetylneuraminate transmembrane transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015784 P GDP-mannose transmembrane transport
GO:0015785 P UDP-galactose transmembrane transport
GO:0015786 P UDP-glucose transmembrane transport
GO:0015787 P UDP-glucuronic acid transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015789 P UDP-N-acetylgalactosamine transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0036066 P protein O-linked fucosylation
GO:0036071 P N-glycan fucosylation
GO:0036085 P GDP-fucose import into Golgi lumen
GO:0048193 P Golgi vesicle transport
1568 O_BomoMSG11411_internal:A_BomoMSG_c23280_g1_i1
831bp
 protein_piccolo_[Bombyx_mori]
1569 O_BomoMSG11412_complete:A_BomoMSG_c23280_g1_i1
247bp
1570 O_BomoMSG11413_5prime_partial:A_BomoMSG_c23280_g1_i1
119bp
1571 O_BomoMSG11414_3prime_partial:A_BomoMSG_c23282_g1_i1
643bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
1572 O_BomoMSG11415_3prime_partial:A_BomoMSG_c23282_g1_i2
289bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
1573 O_BomoMSG11416_3prime_partial:A_BomoMSG_c23282_g1_i3
631bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
1574 O_BomoMSG11417_3prime_partial:A_BomoMSG_c23282_g1_i4
643bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
1575 O_BomoMSG11418_3prime_partial:A_BomoMSG_c23282_g1_i5
653bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
1576 O_BomoMSG11419_3prime_partial:A_BomoMSG_c23282_g1_i6
289bp
 uncharacterized_protein_LOC101744580_[Bombyx_mori]
1577 O_BomoMSG1141_3prime_partial:A_BomoMSG_c5386_g1_i1
223bp
 dihydropteridine_reductase_[Bombyx_mori]
GO:0004155 F 6,7-dihydropteridine reductase activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
1578 O_BomoMSG11420_3prime_partial:A_BomoMSG_c23283_g1_i1
383bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_isoform_X4_[Papilio_xuthus]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006895 P Golgi to endosome transport
GO:0007005 P mitochondrion organization
GO:0019898 C extrinsic component of membrane
GO:0042593 P glucose homeostasis
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
1579 O_BomoMSG11421_complete:A_BomoMSG_c23286_g1_i1
126bp
1580 O_BomoMSG11422_complete:A_BomoMSG_c23286_g1_i2
126bp
1581 O_BomoMSG11423_complete:A_BomoMSG_c23289_g1_i1
757bp
 carboxyl/cholinesterase_5BL_[Bombyx_mori]
GO:0004453 F juvenile-hormone esterase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
1582 O_BomoMSG11424_complete:A_BomoMSG_c23289_g1_i1
202bp
1583 O_BomoMSG11425_complete:A_BomoMSG_c23289_g1_i1
106bp
1584 O_BomoMSG11426_3prime_partial:A_BomoMSG_c23289_g1_i2
127bp
 alpha-esterase_47_isoform_l_[Bombyx_mori]
GO:0004104 F cholinesterase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
1585 O_BomoMSG11427_internal:A_BomoMSG_c23290_g1_i1
272bp
 myelin_regulatory_factor_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0014003 P oligodendrocyte development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0022010 P central nervous system myelination
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032286 P central nervous system myelin maintenance
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048709 P oligodendrocyte differentiation
1586 O_BomoMSG11428_complete:A_BomoMSG_c23290_g1_i1
163bp
1587 O_BomoMSG11429_internal:A_BomoMSG_c23290_g1_i2
193bp
 myelin_regulatory_factor_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0014003 P oligodendrocyte development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0022010 P central nervous system myelination
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032286 P central nervous system myelin maintenance
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048709 P oligodendrocyte differentiation
1588 O_BomoMSG1142_internal:A_BomoMSG_c5396_g1_i1
134bp
 PREDICTED:_uncharacterized_protein_LOC106126064_[Papilio_xuthus]
1589 O_BomoMSG11430_5prime_partial:A_BomoMSG_c23290_g1_i2
135bp
1590 O_BomoMSG11431_5prime_partial:A_BomoMSG_c23292_g1_i1
158bp
 deoxyhypusine_synthase_[Bombyx_mori]
GO:0008612 P peptidyl-lysine modification to peptidyl-hypusine
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0034038 F deoxyhypusine synthase activity
GO:0050983 P obsolete deoxyhypusine biosynthetic process from spermidine
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