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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13141 O_BomoMSG21828_3prime_partial:A_BomoMSG_c26991_g1_i6
280bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
13142 O_BomoMSG21829_complete:A_BomoMSG_c26992_g1_i1
104bp
13143 O_BomoMSG2182_internal:A_BomoMSG_c10288_g1_i1
188bp
 uncharacterized_protein_LOC101736412_[Bombyx_mori]
13144 O_BomoMSG21830_complete:A_BomoMSG_c26992_g1_i2
104bp
13145 O_BomoMSG21831_complete:A_BomoMSG_c26992_g1_i3
104bp
13146 O_BomoMSG21832_complete:A_BomoMSG_c26992_g1_i4
104bp
13147 O_BomoMSG21833_complete:A_BomoMSG_c26992_g1_i5
104bp
13148 O_BomoMSG21834_3prime_partial:A_BomoMSG_c26993_g1_i1
249bp
 uncharacterized_protein_LOC101737292_[Bombyx_mori]
13149 O_BomoMSG21835_complete:A_BomoMSG_c26993_g1_i1
124bp
13150 O_BomoMSG21836_5prime_partial:A_BomoMSG_c26993_g2_i1
113bp
 uncharacterized_protein_LOC101737292_[Bombyx_mori]
13151 O_BomoMSG21837_3prime_partial:A_BomoMSG_c26993_g1_i2
560bp
 uncharacterized_protein_LOC101737292_[Bombyx_mori]
13152 O_BomoMSG21838_complete:A_BomoMSG_c26993_g1_i2
124bp
13153 O_BomoMSG21839_5prime_partial:A_BomoMSG_c26994_g1_i1
167bp
 PREDICTED:_uncharacterized_protein_LOC106141537_[Amyelois_transitella]
13154 O_BomoMSG2183_complete:A_BomoMSG_c10290_g1_i1
1236bp
 coatomer_protein_complex_subunit_alpha_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
13155 O_BomoMSG21840_complete:A_BomoMSG_c26994_g1_i2
428bp
 PREDICTED:_uncharacterized_protein_LOC106141537_[Amyelois_transitella]
13156 O_BomoMSG21841_5prime_partial:A_BomoMSG_c26995_g1_i2
631bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
13157 O_BomoMSG21842_complete:A_BomoMSG_c26995_g1_i3
418bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
13158 O_BomoMSG21843_complete:A_BomoMSG_c26995_g1_i4
627bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
13159 O_BomoMSG21844_5prime_partial:A_BomoMSG_c26995_g1_i5
147bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
13160 O_BomoMSG21845_5prime_partial:A_BomoMSG_c26995_g1_i6
392bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
13161 O_BomoMSG21846_internal:A_BomoMSG_c26996_g1_i1
462bp
 polynucleotide_5'-hydroxyl-kinase_NOL9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000448 P cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051731 F polynucleotide 5'-hydroxyl-kinase activity
13162 O_BomoMSG21847_complete:A_BomoMSG_c26996_g1_i1
128bp
13163 O_BomoMSG21848_5prime_partial:A_BomoMSG_c26996_g1_i1
122bp
13164 O_BomoMSG21849_internal:A_BomoMSG_c26996_g1_i2
436bp
 polynucleotide_5'-hydroxyl-kinase_NOL9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000448 P cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051731 F polynucleotide 5'-hydroxyl-kinase activity
13165 O_BomoMSG2184_complete:A_BomoMSG_c10290_g1_i1
256bp
13166 O_BomoMSG21850_complete:A_BomoMSG_c26996_g1_i2
128bp
13167 O_BomoMSG21851_5prime_partial:A_BomoMSG_c26996_g1_i2
122bp
13168 O_BomoMSG21852_internal:A_BomoMSG_c26996_g1_i3
931bp
 polynucleotide_5'-hydroxyl-kinase_NOL9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000448 P cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051731 F polynucleotide 5'-hydroxyl-kinase activity
13169 O_BomoMSG21853_complete:A_BomoMSG_c26996_g1_i3
128bp
13170 O_BomoMSG21854_5prime_partial:A_BomoMSG_c26996_g1_i3
122bp
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