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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13111 O_BomoMSG21800_internal:A_BomoMSG_c26989_g1_i6
1731bp
 restin_homolog_isoform_X8_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13112 O_BomoMSG21801_5prime_partial:A_BomoMSG_c26989_g1_i6
119bp
13113 O_BomoMSG21802_complete:A_BomoMSG_c26989_g1_i6
109bp
13114 O_BomoMSG21803_3prime_partial:A_BomoMSG_c26989_g1_i7
1760bp
 restin_homolog_isoform_X4_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13115 O_BomoMSG21804_5prime_partial:A_BomoMSG_c26989_g1_i7
119bp
13116 O_BomoMSG21805_complete:A_BomoMSG_c26989_g1_i7
113bp
13117 O_BomoMSG21806_complete:A_BomoMSG_c26989_g1_i7
109bp
13118 O_BomoMSG21807_3prime_partial:A_BomoMSG_c26989_g1_i8
1721bp
 restin_homolog_isoform_X7_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13119 O_BomoMSG21808_5prime_partial:A_BomoMSG_c26989_g1_i8
119bp
13120 O_BomoMSG21809_complete:A_BomoMSG_c26989_g1_i8
109bp
13121 O_BomoMSG2180_5prime_partial:A_BomoMSG_c10282_g1_i1
116bp
13122 O_BomoMSG21810_3prime_partial:A_BomoMSG_c26989_g1_i15
1785bp
 restin_homolog_isoform_X3_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13123 O_BomoMSG21811_complete:A_BomoMSG_c26989_g1_i15
138bp
13124 O_BomoMSG21812_5prime_partial:A_BomoMSG_c26989_g1_i15
119bp
13125 O_BomoMSG21813_complete:A_BomoMSG_c26989_g1_i15
109bp
13126 O_BomoMSG21814_internal:A_BomoMSG_c26989_g1_i16
490bp
 restin_homolog_isoform_X8_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13127 O_BomoMSG21815_complete:A_BomoMSG_c26989_g1_i16
109bp
13128 O_BomoMSG21816_5prime_partial:A_BomoMSG_c26989_g1_i17
392bp
 restin_homolog_isoform_X8_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
13129 O_BomoMSG21817_complete:A_BomoMSG_c26989_g1_i17
109bp
13130 O_BomoMSG21818_internal:A_BomoMSG_c26990_g1_i1
171bp
 probable_ATP-dependent_RNA_helicase_kurz_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
13131 O_BomoMSG21819_internal:A_BomoMSG_c26990_g1_i3
426bp
 probable_ATP-dependent_RNA_helicase_kurz_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
13132 O_BomoMSG2181_3prime_partial:A_BomoMSG_c10283_g1_i1
143bp
 coiled-coil_domain-containing_protein_115_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0030137 C COPI-coated vesicle
13133 O_BomoMSG21820_3prime_partial:A_BomoMSG_c26990_g1_i4
1195bp
 probable_ATP-dependent_RNA_helicase_kurz_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
13134 O_BomoMSG21821_complete:A_BomoMSG_c26990_g1_i4
155bp
13135 O_BomoMSG21822_internal:A_BomoMSG_c26990_g1_i5
845bp
 probable_ATP-dependent_RNA_helicase_kurz_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
13136 O_BomoMSG21823_internal:A_BomoMSG_c26990_g1_i6
986bp
 probable_ATP-dependent_RNA_helicase_kurz_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
13137 O_BomoMSG21824_3prime_partial:A_BomoMSG_c26991_g1_i1
280bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
13138 O_BomoMSG21825_internal:A_BomoMSG_c26991_g1_i3
169bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
13139 O_BomoMSG21826_complete:A_BomoMSG_c26991_g1_i4
116bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
13140 O_BomoMSG21827_3prime_partial:A_BomoMSG_c26991_g1_i5
280bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
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