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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12061 O_BomoMSG20856_complete:A_BomoMSG_c26780_g1_i4
101bp
12062 O_BomoMSG20857_internal:A_BomoMSG_c26780_g1_i5
113bp
 PREDICTED:_choline/ethanolaminephosphotransferase_1-like,_partial_[Amyelois_transitella]
GO:0004142 F diacylglycerol cholinephosphotransferase activity
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
12063 O_BomoMSG20858_complete:A_BomoMSG_c26780_g1_i6
122bp
 cholinephosphotransferase_1_isoform_X4_[Bombyx_mori]
GO:0004142 F diacylglycerol cholinephosphotransferase activity
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
12064 O_BomoMSG20859_complete:A_BomoMSG_c26781_g1_i1
520bp
 ATP-dependent_RNA_helicase_DDX54-like_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
12065 O_BomoMSG2085_complete:A_BomoMSG_c10024_g1_i2
171bp
 thymosin_isoform_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
12066 O_BomoMSG20860_5prime_partial:A_BomoMSG_c26781_g1_i1
211bp
12067 O_BomoMSG20861_complete:A_BomoMSG_c26781_g1_i1
143bp
12068 O_BomoMSG20862_complete:A_BomoMSG_c26783_g1_i1
543bp
 phosphatidylinositol_3-kinase_1_[Bombyx_mori]
12069 O_BomoMSG20863_3prime_partial:A_BomoMSG_c26784_g1_i2
629bp
 perilipin-4_isoform_X6_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
12070 O_BomoMSG20864_complete:A_BomoMSG_c26784_g2_i1
372bp
 KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_3_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017124 F SH3 domain binding
GO:0044822 F RNA binding
12071 O_BomoMSG20865_complete:A_BomoMSG_c26784_g2_i1
161bp
12072 O_BomoMSG20866_complete:A_BomoMSG_c26784_g2_i2
350bp
 KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_3_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007283 P spermatogenesis
GO:0017124 F SH3 domain binding
GO:0044822 F RNA binding
12073 O_BomoMSG20867_complete:A_BomoMSG_c26784_g2_i2
150bp
12074 O_BomoMSG20868_complete:A_BomoMSG_c26784_g2_i2
139bp
12075 O_BomoMSG20869_3prime_partial:A_BomoMSG_c26784_g1_i3
658bp
 perilipin-4_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
12076 O_BomoMSG2086_complete:A_BomoMSG_c10025_g1_i1
263bp
 proteasome_subunit_beta_type-4_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0001530 F lipopolysaccharide binding
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002862 P negative regulation of inflammatory response to antigenic stimulus
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0070062 C extracellular exosome
12077 O_BomoMSG20870_complete:A_BomoMSG_c26784_g1_i4
830bp
 perilipin-4_isoform_X5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
12078 O_BomoMSG20871_complete:A_BomoMSG_c26784_g2_i3
372bp
 KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_3_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017124 F SH3 domain binding
GO:0044822 F RNA binding
12079 O_BomoMSG20872_complete:A_BomoMSG_c26784_g2_i3
161bp
12080 O_BomoMSG20873_5prime_partial:A_BomoMSG_c26784_g1_i6
645bp
 perilipin-4_isoform_X8_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
12081 O_BomoMSG20874_complete:A_BomoMSG_c26784_g1_i7
446bp
 perilipin-4_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
12082 O_BomoMSG20875_5prime_partial:A_BomoMSG_c26785_g1_i1
124bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
12083 O_BomoMSG20876_5prime_partial:A_BomoMSG_c26785_g1_i2
150bp
 probable_cytochrome_P450_49a1-like_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
12084 O_BomoMSG20877_5prime_partial:A_BomoMSG_c26786_g2_i1
142bp
 RNA_3'-terminal_phosphate_cyclase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0016874 F ligase activity
GO:0044822 F RNA binding
12085 O_BomoMSG20878_complete:A_BomoMSG_c26786_g2_i2
359bp
 RNA_3'-terminal_phosphate_cyclase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0016874 F ligase activity
GO:0044822 F RNA binding
12086 O_BomoMSG20879_5prime_partial:A_BomoMSG_c26786_g2_i3
206bp
 RNA_3'-terminal_phosphate_cyclase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0016874 F ligase activity
GO:0044822 F RNA binding
12087 O_BomoMSG2087_complete:A_BomoMSG_c10030_g1_i1
280bp
 phospholipid_phosphatase_5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0008195 F phosphatidate phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0046839 P phospholipid dephosphorylation
12088 O_BomoMSG20880_5prime_partial:A_BomoMSG_c26787_g1_i2
245bp
 double-stranded_RNA-binding_protein_Staufen_homolog_2_isoform_X2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
12089 O_BomoMSG20881_complete:A_BomoMSG_c26787_g1_i2
107bp
12090 O_BomoMSG20882_3prime_partial:A_BomoMSG_c26787_g1_i2
102bp
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