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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11641 O_BomoMSG20478_5prime_partial:A_BomoMSG_c26697_g1_i4
341bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019511 P peptidyl-proline hydroxylation
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0071731 P response to nitric oxide
11642 O_BomoMSG20479_5prime_partial:A_BomoMSG_c26697_g1_i5
448bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0032364 P oxygen homeostasis
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060347 P heart trabecula formation
GO:0060412 P ventricular septum morphogenesis
GO:0060711 P labyrinthine layer development
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071731 P response to nitric oxide
11643 O_BomoMSG2047_complete:A_BomoMSG_c9924_g1_i1
688bp
 NADPH_cytochrome_P450_reductase_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0010181 F FMN binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
11644 O_BomoMSG20480_5prime_partial:A_BomoMSG_c26698_g1_i1
460bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11645 O_BomoMSG20481_5prime_partial:A_BomoMSG_c26698_g1_i2
484bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11646 O_BomoMSG20482_complete:A_BomoMSG_c26698_g1_i3
482bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11647 O_BomoMSG20483_5prime_partial:A_BomoMSG_c26698_g1_i4
346bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
11648 O_BomoMSG20484_5prime_partial:A_BomoMSG_c26698_g1_i5
207bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006979 P response to oxidative stress
GO:0007399 P nervous system development
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11649 O_BomoMSG20485_5prime_partial:A_BomoMSG_c26698_g1_i5
101bp
11650 O_BomoMSG20486_5prime_partial:A_BomoMSG_c26698_g1_i6
320bp
 glutathione_synthetase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
11651 O_BomoMSG20487_5prime_partial:A_BomoMSG_c26700_g1_i1
230bp
 transmembrane_protein_245_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11652 O_BomoMSG20488_complete:A_BomoMSG_c26700_g1_i2
873bp
 transmembrane_protein_245_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11653 O_BomoMSG20489_5prime_partial:A_BomoMSG_c26700_g1_i3
338bp
 transmembrane_protein_245_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11654 O_BomoMSG2048_complete:A_BomoMSG_c9924_g1_i1
117bp
11655 O_BomoMSG20490_complete:A_BomoMSG_c26700_g1_i4
879bp
 transmembrane_protein_245_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11656 O_BomoMSG20491_5prime_partial:A_BomoMSG_c26700_g1_i5
320bp
 transmembrane_protein_245_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11657 O_BomoMSG20492_complete:A_BomoMSG_c26700_g1_i6
879bp
 transmembrane_protein_245_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11658 O_BomoMSG20493_complete:A_BomoMSG_c26701_g1_i1
162bp
 protein_phosphatase_inhibitor_2-like_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0004864 F protein phosphatase inhibitor activity
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0009966 P regulation of signal transduction
GO:0043086 P negative regulation of catalytic activity
GO:0043666 P regulation of phosphoprotein phosphatase activity
11659 O_BomoMSG20494_5prime_partial:A_BomoMSG_c26703_g1_i3
556bp
 sentrin-specific_protease_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006508 P proteolysis
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010724 P regulation of definitive erythrocyte differentiation
GO:0016787 F hydrolase activity
GO:0016925 P protein sumoylation
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
GO:0031965 C nuclear membrane
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070139 F SUMO-specific endopeptidase activity
GO:0097190 P apoptotic signaling pathway
11660 O_BomoMSG20495_complete:A_BomoMSG_c26703_g1_i3
219bp
11661 O_BomoMSG20496_3prime_partial:A_BomoMSG_c26704_g1_i1
854bp
 zinc_finger_CCCH_domain-containing_protein_14_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008143 F poly(A) binding
GO:0016607 C nuclear speck
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:1900364 P negative regulation of mRNA polyadenylation
11662 O_BomoMSG20497_5prime_partial:A_BomoMSG_c26704_g1_i1
164bp
11663 O_BomoMSG20498_complete:A_BomoMSG_c26704_g1_i1
119bp
11664 O_BomoMSG20499_complete:A_BomoMSG_c26704_g1_i1
114bp
11665 O_BomoMSG2049_complete:A_BomoMSG_c9924_g1_i1
105bp
11666 O_BomoMSG204_internal:A_BomoMSG_c890_g1_i1
110bp
 TBC1_domain_family_member_5_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0010008 C endosome membrane
GO:0010508 P positive regulation of autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030122 C AP-2 adaptor complex
GO:0030904 C retromer complex
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0035612 F AP-2 adaptor complex binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042594 P response to starvation
GO:0090630 P activation of GTPase activity
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1902017 P regulation of cilium assembly
GO:1990316 C Atg1/ULK1 kinase complex
11667 O_BomoMSG20500_complete:A_BomoMSG_c26706_g1_i1
347bp
 dihydroxyacetone_phosphate_acyltransferase_isoform_X1_[Bombyx_mori]
11668 O_BomoMSG20501_3prime_partial:A_BomoMSG_c26706_g1_i1
147bp
11669 O_BomoMSG20502_complete:A_BomoMSG_c26706_g1_i2
669bp
 dihydroxyacetone_phosphate_acyltransferase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0006650 P glycerophospholipid metabolic process
GO:0007416 P synapse assembly
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008374 F O-acyltransferase activity
GO:0008611 P ether lipid biosynthetic process
GO:0016020 C membrane
GO:0016287 F glycerone-phosphate O-acyltransferase activity
GO:0016290 F palmitoyl-CoA hydrolase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0021587 P cerebellum morphogenesis
GO:0030913 P paranodal junction assembly
GO:0042493 P response to xenobiotic stimulus
GO:0042552 P myelination
GO:0042594 P response to starvation
GO:0044255 P cellular lipid metabolic process
GO:0061024 P membrane organization
GO:0070542 P response to fatty acid
11670 O_BomoMSG20503_complete:A_BomoMSG_c26706_g1_i2
166bp
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